Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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ADG92470.1Secretion protein HlyD family protein; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: tdn:Suden_0878 secretion protein HlyD; PFAM: secretion protein HlyD family protein; SPTR: Q30S75 Secretion protein HlyD; PFAM: HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (270 aa)    
Predicted Functional Partners:
ADG92471.1
Acriflavin resistance protein; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: tdn:Suden_0877 AcrB/AcrD/AcrF family protein; PFAM: acriflavin resistance protein; SPTR: Q30S76 AcrB/AcrD/AcrF family protein; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.942
ADG92472.1
COGs: COG0841 Cation/multidrug efflux pump; KEGG: sun:SUN_0555 acriflavin resistance AcrB/AcrD/AcrF family protein; SPTR: B6BLH4 Cation efflux system; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.935
ADG93601.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: abu:Abu_0993 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: A8ETH9 Outer membrane efflux protein; PFAM: Outer membrane efflux protein.
 
 0.755
ADG94673.1
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764:IPR001036; KEGG: tdn:Suden_0536 resistance-nodulation-cell division family transporter; PFAM: acriflavin resistance protein; SPTR: Q30T66 Resistance-Nodulation-Cell Division Superfamily transporter; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family.
 
 
 0.721
ADG92299.1
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764:IPR001036; KEGG: wsu:WS0770 multidrug resistance protein MexB; PFAM: acriflavin resistance protein; SPTR: C2A2V6 Hydrophobe/amphiphile efflux-1 (HAE1) family transporter; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family.
 
 
 0.716
ADG94498.1
COGs: COG1538 Outer membrane protein; KEGG: ppd:Ppro_1440 outer membrane efflux protein; SPTR: A1ANY6 Outer membrane efflux protein; PFAM: Outer membrane efflux protein.
 
 0.704
ADG92477.1
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764:IPR001036; KEGG: abu:Abu_2223 Acr family multidrug efflux protein; PFAM: acriflavin resistance protein; SPTR: A8EWW3 Multidrug efflux protein, Acr family; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family.
 
 
 0.691
ADG94729.1
Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764:IPR001036; KEGG: mmw:Mmwyl1_0997 hydrophobe/amphiphile efflux-1 (HAE1) family protein; PFAM: acriflavin resistance protein; SPTR: A6VTZ9 Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family.
 
 
 0.684
ADG92041.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR000630:IPR003838; KEGG: abu:Abu_0709 ABC transporter, permease protein; PFAM: protein of unknown function DUF214; SPTR: A8ESQ0 ABC transporter, permease protein; PFAM: Predicted permease.
 
 
 0.672
ADG93153.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: asa:ASA_0523 outer membrane protein TolC; PFAM: outer membrane efflux protein; SPTR: A4SIG7 Outer membrane protein TolC; PFAM: Outer membrane efflux protein.
  
 0.657
Your Current Organism:
Arcobacter nitrofigilis
NCBI taxonomy Id: 572480
Other names: A. nitrofigilis DSM 7299, Arcobacter nitrofigilis DSM 7299, Arcobacter nitrofigilis str. DSM 7299, Arcobacter nitrofigilis strain DSM 7299
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