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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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ADG92593.1COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR003594:IPR018247:IPR005467; KEGG: abu:Abu_1637 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: B6BHU8 Diguanylate cyclase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (728 aa)    
Predicted Functional Partners:
ADG92356.1
Putative PAS/PAC sensor protein; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789:IPR000014:IPR000700:IPR013767:IPR 011006; KEGG: wsu:WS1304 diguanylate cyclase (fragment); PFAM: response regulator receiver; PAS fold domain protein; SMART: response regulator receiver; SPTR: A8V332 DIGUANYLATE CYCLASE; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box.
 
 
 0.690
ADG92592.1
COGs: COG1286 membrane protein required for colicin V production; InterPro IPR003825; KEGG: abu:Abu_0655 colicin V production protein; PFAM: Colicin V production protein; SPTR: A8ESJ6 Colicin V production protein; PFAM: Colicin V production protein.
       0.588
lysS
COGs: COG1190 Lysyl-tRNA synthetase (class II); InterProIPR004365:IPR004364:IPR012340:IPR018149:IPR 016027:IPR002313:IPR006195; KEGG: abu:Abu_0654 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: A8ESJ5 Lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.576
ADG91701.1
Transcriptional regulator, NifA subfamily, Fis Family; COGs: COG3604 Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains; InterProIPR020441:IPR009057:IPR002078:IPR003018:IPR 003593:IPR002197; KEGG: wsu:WS1404 NifA family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: GAF domain protein; AAA ATPase; SPTR: Q7M8U4 TRANSCRIPTIONAL REGULATOR (NIFA FAMILY); PFAM: GAF domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: Nif-specific reg [...]
 
 
 
 0.574
ispG
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.
       0.551
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
       0.529
ADG92589.1
Sporulation domain protein; InterPro IPR007730; KEGG: abu:Abu_0652 hypothetical protein; PFAM: Sporulation domain protein; SPTR: A8ESJ3 Putative uncharacterized protein; PFAM: Sporulation related domain.
       0.489
ADG93309.1
COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR000160:IPR001789:IPR011006; KEGG: afl:Aflv_1936 response regulator with a diguanylate cyclase output domain; PFAM: response regulator receiver; GGDEF domain containing protein; SMART: response regulator receiver; GGDEF domain containing protein; SPTR: B6BN46 Response regulator PleD; TIGRFAM: diguanylate cyclase; PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
 
 
 0.487
ADG92588.1
COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR006805:IPR015890:IPR005801:IPR019999; KEGG: abu:Abu_0651 anthranilate synthase, component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; PRIAM: Anthranilate synthase; SPTR: A8ESJ2 Anthranilate synthase, component I; PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme.
       0.472
ADG94147.1
InterPro IPR005648; KEGG: abu:Abu_1959 flagellar hook assembly protein FlgD; PFAM: flagellar hook capping protein; SPTR: A8EW58 Flagellar hook assembly protein FlgD; PFAM: Flagellar hook capping protein.
   
    0.469
Your Current Organism:
Arcobacter nitrofigilis
NCBI taxonomy Id: 572480
Other names: A. nitrofigilis DSM 7299, Arcobacter nitrofigilis DSM 7299, Arcobacter nitrofigilis str. DSM 7299, Arcobacter nitrofigilis strain DSM 7299
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