STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG92628.14Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450:IPR000813:IPR017900:IPR017896; KEGG: abu:Abu_1510 formate dehydrogenase, iron-sulfur subunit FdhB; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8EUX8 Formate dehydrogenase, iron-sulfur subunit FdhB; PFAM: 4Fe-4S binding domain. (198 aa)    
Predicted Functional Partners:
ADG92629.1
Molybdopterin oxidoreductase; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006656:IPR006657:IPR009010; KEGG: tdn:Suden_0820 formate dehydrogenase alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; SPTR: Q30SD2 Formate dehydrogenase alpha subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.997
ADG92634.1
COGs: COG2864 Cytochrome b subunit of formate dehydrogenase; InterPro IPR016174:IPR006471; KEGG: dps:DP2988 formate dehydrogenase, gamma subunit; SPTR: B6BLJ2 Formate dehydrogenase, gamma subunit; TIGRFAM: formate dehydrogenase, gamma subunit; PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: formate dehydrogenase, gamma subunit.
 
 0.995
ADG92636.1
Molybdopterin oxidoreductase; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006656:IPR006657:IPR009010; KEGG: dps:DP2986 formate dehydrogenase, chain A; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; SPTR: Q6AIW5 Probable formate dehydrogenase, chain A; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.993
ADG92630.1
Molybdopterin oxidoreductase Fe4S4 region; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR006963:IPR006656:IPR006655:IPR006311:IPR 017909; KEGG: abu:Abu_1498 formate dehydrogenase, large subunit FdhA; PFAM: molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; SPTR: A8EUX9 Formate dehydrogenase, large subunit FdhA; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 domain.
 
 
 0.960
ADG94463.1
Molybdopterin oxidoreductase; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR006655:IPR009010:IPR006963:IPR006656:IPR 006657; KEGG: sun:SUN_0228 formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; SPTR: A6Q6S9 Formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.946
ADG92627.1
Putative FdhC protein; InterPro IPR016174; KEGG: abu:Abu_1496 putative FdhC protein; SPTR: A8EUX7 Putative FdhC protein; PFAM: Prokaryotic cytochrome b561.
  
 
 0.939
ADG92637.1
Molybdopterin oxidoreductase; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006963:IPR006656:IPR006311:IPR017909; KEGG: dps:DP2986 formate dehydrogenase, chain A; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; SPTR: Q6AIW5 Probable formate dehydrogenase, chain A; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
 
 
 0.931
ADG92635.1
4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450:IPR017900:IPR017896; KEGG: dps:DP2987 formate dehydrogenase, iron-sulfur chain; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q6AIW4 Probable formate dehydrogenase, iron-sulfur chain; PFAM: 4Fe-4S binding domain.
 
  
 
0.927
ADG93659.1
COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: wsu:WS0937 hypothetical protein; PFAM: Polysulphide reductase NrfD; SPTR: Q7MRY5 Putative uncharacterized protein nuoM; PFAM: Polysulphide reductase, NrfD.
 
 
 0.921
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
     
  0.900
Your Current Organism:
Arcobacter nitrofigilis
NCBI taxonomy Id: 572480
Other names: A. nitrofigilis DSM 7299, Arcobacter nitrofigilis DSM 7299, Arcobacter nitrofigilis str. DSM 7299, Arcobacter nitrofigilis strain DSM 7299
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