STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG92731.1COGs: COG3194 Ureidoglycolate hydrolase; InterPro IPR007247; KEGG: pap:PSPA7_3821 ureidoglycolate hydrolase; PFAM: Ureidoglycolate hydrolase; PRIAM: Ureidoglycolate hydrolase; SPTR: A6CZ51 Ureidoglycolate hydrolase; PFAM: Ureidoglycolate hydrolase. (171 aa)    
Predicted Functional Partners:
alc
Allantoicase; COGs: COG4266 Allantoicase; InterPro IPR015908:IPR005164:IPR008979; KEGG: pfo:Pfl01_1704 allantoicase; PFAM: Allantoicase region; PRIAM: Allantoicase; SPTR: C8PUG8 Allantoicase; TIGRFAM: allantoicase; PFAM: Allantoicase repeat; TIGRFAM: allantoicase; Belongs to the allantoicase family.
 
 0.996
ureA
Urease, gamma subunit; COGs: COG0832 Urea amidohydrolase (urease) beta subunit; InterPro IPR002026:IPR002019:IPR008223; KEGG: abu:Abu_0806 fusion of urease beta and gamma subunits; PFAM: Urease gamma subunit region; Urease beta subunit; PRIAM: Urease; SPTR: A8ESZ7 Fusion of urease beta and gamma subunits; TIGRFAM: urease, gamma subunit; urease, beta subunit; PFAM: Urease beta subunit; Urease, gamma subunit; TIGRFAM: urease, beta subunit; urease, gamma subunit; Belongs to the urease beta subunit family.
    
 0.959
ureB
Urease, alpha subunit; COGs: COG0804 Urea amidohydrolase (urease) alpha subunit; InterProIPR011612:IPR006680:IPR017952:IPR017950:IPR 011059:IPR005848:IPR017951; KEGG: abu:Abu_0807 urease subunit alpha; PFAM: amidohydrolase; Urease alpha-subunit domain protein; PRIAM: Urease; SPTR: A8ESZ8 Urease subunit beta; TIGRFAM: urease, alpha subunit; PFAM: Urease alpha-subunit, N-terminal domain; Amidohydrolase family; TIGRFAM: urease, alpha subunit.
    
  0.950
ADG91883.1
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; COGs: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; InterPro IPR000887:IPR013785; KEGG: hpa:HPAG1_1037 2-keto-3-deoxy-6-phosphogluconate aldolase; PFAM: KDPG and KHG aldolase; PRIAM: 2-dehydro-3-deoxy-phosphogluconate aldolase; SPTR: Q1CSG8 2-keto-3-deoxy-6-phosphogluconate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase.
     
  0.800
ADG93318.1
Protein of unknown function DUF224 cysteine-rich region domain protein; COGs: COG0247 Fe-S oxidoreductase; InterProIPR017900:IPR017896:IPR009051:IPR012257:IPR 012285:IPR001450:IPR004017; KEGG: abu:Abu_1266 anaerobic glycerol-3-phosphate dehydrogenase, subunit C (GlpC); PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8EU99 Anaerobic glycerol-3-phosphate dehydrogenase, subunit C (GlpC); PFAM: Cysteine-rich domain.
     
  0.800
ADG93957.1
FAD linked oxidase domain protein; COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR016166:IPR016164:IPR006094:IPR004113:IPR 016167:IPR016168; KEGG: abu:Abu_1840 glycolate oxidase; PFAM: FAD linked oxidase domain protein; SPTR: A8EVV7 Glycolate oxidase; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD.
     
  0.800
ADG94461.1
Putative transcriptional regulator, GntR family; COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterPro IPR015421:IPR015422:IPR015424:IPR004839; KEGG: abu:Abu_2022 aminotransferase, classes I and II; PFAM: aminotransferase class I and II; SPTR: A8EWB6 Aminotransferase, classes I and II; PFAM: Aminotransferase class I and II.
     
  0.800
ADG92729.1
Transcriptional regulator, GntR family; COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR011711:IPR011991; KEGG: psa:PST_3088 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; SPTR: A4VP25 Transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
 
    0.771
ADG92735.1
Urease complex component; COGs: COG0830 Urease accessory protein UreF; KEGG: abu:Abu_0809 urease complex component; SPTR: A8ET00 Urease complex component; PFAM: UreF.
       0.526
ADG92734.1
UreE urease accessory domain protein; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
       0.524
Your Current Organism:
Arcobacter nitrofigilis
NCBI taxonomy Id: 572480
Other names: A. nitrofigilis DSM 7299, Arcobacter nitrofigilis DSM 7299, Arcobacter nitrofigilis str. DSM 7299, Arcobacter nitrofigilis strain DSM 7299
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.