STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG92738.1MotA/TolQ/ExbB proton channel; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: abu:Abu_0381 biopolymer transport protein ExbB; PFAM: MotA/TolQ/ExbB proton channel; SPTR: A8ERT2 Biopolymer transport protein ExbB; PFAM: MotA/TolQ/ExbB proton channel family. (169 aa)    
Predicted Functional Partners:
ADG92737.1
COGs: COG0848 Biopolymer transport protein; InterPro IPR003400:IPR000871; KEGG: abu:Abu_0380 biopolymer transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: A8ERT1 Biopolymer transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR.
 
 
 0.972
ADG92739.1
COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR003538:IPR006260; KEGG: abu:Abu_0703 TonB-dependent receptor protein; PFAM: Gram-negative tonB protein; SPTR: A8ESP4 TonB-dependent receptor protein; TIGRFAM: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
  
 
 0.889
ADG92303.1
COGs: COG0848 Biopolymer transport protein; InterPro IPR003400:IPR000871; KEGG: abu:Abu_0380 biopolymer transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: A8ERT1 Biopolymer transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR.
 
 
 0.876
ADG92229.1
COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: noc:Noc_0609 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Q1N4L4 TonB system transport protein ExbD2; PFAM: Biopolymer transport protein ExbD/TolR.
 
 
 0.850
ADG93509.1
COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: abu:Abu_0704 biopolymer transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: A8ESP5 Biopolymer transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TonB system transport protein ExbD, group 2.
 
 
 0.720
ADG93950.1
Type II and III secretion system protein; COGs: COG1450 Type II secretory pathway component PulD; InterPro IPR001775:IPR001814:IPR004846; KEGG: abu:Abu_1833 general secretion pathway protein D; PFAM: type II and III secretion system protein; SPTR: A8EVV0 General secretion pathway protein D; PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein.
  
    0.690
ADG93308.1
ABC transporter related protein; COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: abu:Abu_1274 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: A8EUA7 ABC transporter, ATP-binding protein; PFAM: ABC transporter.
 
   
 0.683
ADG93990.1
COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: abu:Abu_1592 biopolymer transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: A8EV67 Biopolymer transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR.
 
 
 0.683
ADG93382.1
COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR016474:IPR001412:IPR010827:IPR000184; KEGG: abu:Abu_1211 outer membrane surface antigen protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; SPTR: A8EU47 Outer membrane surface antigen protein; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein.
  
     0.654
lpxA
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosa mineO-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
   
 0.598
Your Current Organism:
Arcobacter nitrofigilis
NCBI taxonomy Id: 572480
Other names: A. nitrofigilis DSM 7299, Arcobacter nitrofigilis DSM 7299, Arcobacter nitrofigilis str. DSM 7299, Arcobacter nitrofigilis strain DSM 7299
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