STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ADG92879.1Extracellular solute-binding protein, family 7; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389; KEGG: maq:Maqu_0354 TRAP dicarboxylate transporter-DctP subunit; PFAM: Extracellular solute-binding protein, family 7; SPTR: A9DXL9 TRAP dicarboxylate transporter, DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7. (337 aa)    
Predicted Functional Partners:
ADG92878.1
Tripartite ATP-independent periplasmic transporter DctQ component; COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: maq:Maqu_0353 tripartite ATP-independent periplasmic transporter DctQ; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: Q8VPB2 Small transmembrane protein; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component.
 
  
 0.941
ADG92877.1
TRAP dicarboxylate transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656:IPR004681; KEGG: sil:SPO1145 TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: A9DXM3 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit.
 
  
 0.915
ADG93910.1
Tripartite ATP-independent periplasmic transporter DctQ component; COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: nam:NAMH_1493 small integral C4-dicarboxylate membrane transport protein,putative; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: B9L695 Small integral c4-dicarboxylate membrane transport protein,putative; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component.
 
  
 0.841
ADG92876.1
UspA domain protein; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016:IPR014729:IPR006015; KEGG: maq:Maqu_0351 UspA domain-containing protein; PFAM: UspA domain protein; SPTR: A6FPU3 Universal stress protein family protein; PFAM: Universal stress protein family.
 
     0.835
ADG92617.1
TRAP dicarboxylate transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656:IPR004681; KEGG: dde:Dde_1550 TRAP dicarboxylate transporter-DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: Q311P9 TRAP dicarboxylate transporter-DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit.
 
  
 0.781
ADG93911.1
TRAP dicarboxylate transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681:IPR010656; KEGG: nam:NAMH_1494 C4-dicarboxylate transport system permease, large subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: B9L696 C4-dicarboxylate transport system permease, large subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit.
 
  
 0.777
ADG92943.1
TRAP dicarboxylate transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656:IPR004681; KEGG: nam:NAMH_0121 trap dicarboxylate family transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: A6DD06 DctM (C4-dicarboxylate permease, large subunit); TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit.
 
  
 0.737
ADG92946.1
TRAP dicarboxylate transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656:IPR004681; KEGG: swd:Swoo_1735 TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: A3JF18 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit.
 
  
 0.694
ADG92880.1
Creatinase; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587:IPR000994; KEGG: csa:Csal_2732 peptidase M24; PFAM: creatinase; peptidase M24; SPTR: A4BIJ0 Peptidase, M24 family protein; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; TIGRFAM: ectoine utilization protein EutD.
 
     0.672
ADG92941.1
Extracellular solute-binding protein, family 7; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389; KEGG: nam:NAMH_0119 putative secreted protein; PFAM: Extracellular solute-binding protein, family 7; SPTR: B9L7E8 Putative secreted protein; PFAM: Bacterial extracellular solute-binding protein, family 7.
  
     0.668
Your Current Organism:
Arcobacter nitrofigilis
NCBI taxonomy Id: 572480
Other names: A. nitrofigilis DSM 7299, Arcobacter nitrofigilis DSM 7299, Arcobacter nitrofigilis str. DSM 7299, Arcobacter nitrofigilis strain DSM 7299
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