STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ADG93380.1Peptidase M16 domain protein; COGs: COG0612 Zn-dependent peptidase; InterPro IPR011249:IPR011237:IPR011765:IPR007863; KEGG: abu:Abu_1213 M16 family peptidase; PFAM: peptidase M16 domain protein; SPTR: A8EU49 Peptidase, M16 family; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16). (412 aa)    
Predicted Functional Partners:
nuoC
NADH-ubiquinone oxidoreductase chain 49kDa; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
 
 0.995
ADG92174.1
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; COGs: COG0723 Rieske Fe-S protein; InterProIPR017941:IPR017909:IPR006311:IPR006317:IPR 005805; KEGG: abu:Abu_2066 ubiquinol cytochrome c oxidoreductase, 2Fe-2S subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: A8EWG0 Ubiquinol-cytochrome c reductase iron-sulfur subunit; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain; Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; Tat (twin-arginine translocation) pathwa [...]
  
 0.991
ADG92172.1
COGs: COG2857 Cytochrome c1; InterPro IPR009056:IPR013838; KEGG: abu:Abu_2064 ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit; SPTR: A8EWF8 Ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit; PFAM: Cytochrome c; Cytochrome C1 family.
  
 0.990
ADG93779.1
Peptidase M16 domain protein; COGs: COG0612 Zn-dependent peptidase; InterProIPR011249:IPR011765:IPR007863:IPR011237:IPR 001431; KEGG: abu:Abu_0875 putative zinc protease; PFAM: peptidase M16 domain protein; SPTR: A8ET61 Putative zinc protease; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); Belongs to the peptidase M16 family.
  
 0.990
ADG92173.1
Cytochrome b/b6 domain protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.960
ADG94304.1
NADH dehydrogenase (quinone); COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR001949:IPR011538:IPR019554:IPR019575; KEGG: abu:Abu_0311 NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (quinone); SPTR: A8ERL2 NADH-quinone oxidoreductase, F subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain.
   
 
 0.954
ADG94303.1
COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023:IPR012336; KEGG: abu:Abu_0312 NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; PRIAM: NADH dehydrogenase (quinone); SPTR: A8ERL3 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit.
   
 
 0.920
ADG94625.1
NADH (or F420H2) dehydrogenase, subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 30 kDa subunit family.
  
 
 0.876
nuoD
NADH dehydrogenase I, D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
   
 
 0.870
ADG94621.1
NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein; COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterProIPR017900:IPR001041:IPR017896:IPR019574:IPR 001450; KEGG: nis:NIS_0295 NADH dehydrogenase subunit G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A6Q1Q0 NADH-quinone oxidoreductase, chain G; PFAM: NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; 4Fe-4S binding domain.
  
 
 0.865
Your Current Organism:
Arcobacter nitrofigilis
NCBI taxonomy Id: 572480
Other names: A. nitrofigilis DSM 7299, Arcobacter nitrofigilis DSM 7299, Arcobacter nitrofigilis str. DSM 7299, Arcobacter nitrofigilis strain DSM 7299
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