STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG93562.117 kDa surface antigen; InterPro IPR008816; KEGG: abu:Abu_1111 hypothetical protein; PFAM: 17 kDa surface antigen; SPTR: A8ETU7 Putative uncharacterized protein. (185 aa)    
Predicted Functional Partners:
ADG93563.1
COGs: COG2863 Cytochrome c553; InterPro IPR008168:IPR009056:IPR003088; KEGG: abu:Abu_1919 cytochrome c; PFAM: cytochrome c class I; SPTR: B6BHK9 Cytochrome c, class I; PFAM: Cytochrome c.
       0.645
ADG93565.1
COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR009082:IPR005467; KEGG: abu:Abu_1109 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8ETU5 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
 
     0.546
ADG93564.1
KEGG: abu:Abu_1110 hypothetical protein; SPTR: A8ETU6 Putative uncharacterized protein.
       0.483
ADG93566.1
Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867; KEGG: abu:Abu_1108 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: B6BHK7 Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
       0.483
ADG93567.1
KEGG: abu:Abu_1107 hypothetical protein; SPTR: A8ETU3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1104).
       0.483
ADG93185.1
KEGG: sun:SUN_0733 hypothetical protein; SPTR: C2A326 Putative uncharacterized protein.
  
     0.452
Your Current Organism:
Arcobacter nitrofigilis
NCBI taxonomy Id: 572480
Other names: A. nitrofigilis DSM 7299, Arcobacter nitrofigilis DSM 7299, Arcobacter nitrofigilis str. DSM 7299, Arcobacter nitrofigilis strain DSM 7299
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.