Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADG93632.1KEGG: abu:Abu_0910 hypothetical protein; SPTR: A8ET96 Putative uncharacterized protein. (243 aa)    
Predicted Functional Partners:
ADG92260.1
KEGG: ckr:CKR_1031 hypothetical protein; SPTR: B9E0Q7 Putative uncharacterized protein.
  
     0.683
ADG94478.1
KEGG: ckr:CKR_1031 hypothetical protein; SPTR: B9E0Q7 Putative uncharacterized protein.
  
     0.635
ADG92335.1
KEGG: abu:Abu_1090 hypothetical protein; SPTR: A8ETS6 Putative uncharacterized protein.
  
     0.593
ADG93633.1
DTW domain containing protein; COGs: COG3148 conserved hypothetical protein; InterPro IPR005636; KEGG: ote:Oter_3739 DTW domain-containing protein; PFAM: DTW domain containing protein; SPTR: Q26CH3 Putative uncharacterized protein; PFAM: DTW domain.
       0.531
ADG92577.1
Permease YjgP/YjgQ family protein; COGs: COG0795 permease; InterPro IPR005495:IPR000102; KEGG: abu:Abu_0640 hypothetical protein; PFAM: permease YjgP/YjgQ family protein; SPTR: A8ESI1 Conserved hypothetical membrane protein; PFAM: Predicted permease YjgP/YjgQ family.
  
     0.516
ADG94096.1
COGs: COG4378 conserved hypothetical protein; InterPro IPR016772; KEGG: abu:Abu_1767 hypothetical protein; PFAM: Uncharacterised conserved protein UCP020408; SPTR: A8EVP0 Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2325).
  
     0.491
ADG94690.1
InterPro IPR020281; KEGG: abu:Abu_2265 hypothetical protein; SPTR: A8EX05 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF493); Belongs to the UPF0250 family.
  
     0.458
ADG94628.1
AAA ATPase central domain protein; COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003593:IPR003959; KEGG: abu:Abu_2231 AAA ATPase family protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: A8EWX1 AAA family ATPase; PFAM: ATPase family associated with various cellular activities (AAA).
  
     0.414
Your Current Organism:
Arcobacter nitrofigilis
NCBI taxonomy Id: 572480
Other names: A. nitrofigilis DSM 7299, Arcobacter nitrofigilis DSM 7299, Arcobacter nitrofigilis str. DSM 7299, Arcobacter nitrofigilis strain DSM 7299
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