Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADG93649.1COGs: COG2095 Multiple antibiotic transporter; InterPro IPR002771; KEGG: cps:CPS_1844 hypothetical protein; PFAM: multiple antibiotic resistance (MarC)-related protein; SPTR: Q484E1 Putative uncharacterized protein; PFAM: MarC family integral membrane protein; TIGRFAM: conserved hypothetical protein TIGR00427. (205 aa)    
Predicted Functional Partners:
ADG93650.1
Antibiotic biosynthesis monooxygenase; COGs: COG1359 conserved hypothetical protein; InterPro IPR011008:IPR007138; KEGG: bth:BT_1428 hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: Q8A7U6 Putative uncharacterized protein; PFAM: Antibiotic biosynthesis monooxygenase.
       0.481
ADG92313.1
COGs: COG3264 Small-conductance mechanosensitive channel; InterProIPR006685:IPR011066:IPR010920:IPR011014:IPR 006162; KEGG: abu:Abu_0389 mechanosensitive ion channel; PFAM: MscS Mechanosensitive ion channel; SPTR: B5JYK0 MscS Mechanosensitive ion channel; PFAM: Mechanosensitive ion channel; Conserved TM helix.
  
    0.457
ADG93651.1
Transcriptional regulator, AraC family; COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterProIPR018060:IPR009057:IPR003313:IPR000005:IPR 012287; KEGG: cbe:Cbei_3413 AraC protein, arabinose-binding/dimerisation; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A6LYV9 AraC protein, arabinose-binding/dimerisation; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain.
       0.447
ADG93652.1
Lysine exporter protein (LYSE/YGGA); COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: cbe:Cbei_3414 lysine exporter protein LysE/YggA; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: A6LYW0 Lysine exporter protein (LYSE/YGGA); PFAM: LysE type translocator.
       0.444
Your Current Organism:
Arcobacter nitrofigilis
NCBI taxonomy Id: 572480
Other names: A. nitrofigilis DSM 7299, Arcobacter nitrofigilis DSM 7299, Arcobacter nitrofigilis str. DSM 7299, Arcobacter nitrofigilis strain DSM 7299
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