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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG93654.1InterPro IPR007341; KEGG: cpb:Cphamn1_0910 transglycosylase-associated protein; PFAM: Transglycosylase-associated protein; SPTR: B3EPH7 Transglycosylase-associated protein; PFAM: Transglycosylase associated protein. (80 aa)    
Predicted Functional Partners:
ADG93653.1
COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: dol:Dole_0446 Cro-like protein; PFAM: transglutaminase domain protein; SPTR: Q2BNL1 Lipoprotein, putative; PFAM: Transglutaminase-like superfamily.
       0.757
ADG93652.1
Lysine exporter protein (LYSE/YGGA); COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: cbe:Cbei_3414 lysine exporter protein LysE/YggA; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: A6LYW0 Lysine exporter protein (LYSE/YGGA); PFAM: LysE type translocator.
       0.512
ADG93651.1
Transcriptional regulator, AraC family; COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterProIPR018060:IPR009057:IPR003313:IPR000005:IPR 012287; KEGG: cbe:Cbei_3413 AraC protein, arabinose-binding/dimerisation; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: A6LYV9 AraC protein, arabinose-binding/dimerisation; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain.
       0.508
ADG93655.1
Thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterProIPR006662:IPR012336:IPR013766:IPR017937:IPR 012335:IPR005746:IPR017936; KEGG: abu:Abu_1880 thioredoxin; PFAM: Thioredoxin domain; SPTR: A8EVZ0 Thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin; Belongs to the thioredoxin family.
  
    0.489
ADG93650.1
Antibiotic biosynthesis monooxygenase; COGs: COG1359 conserved hypothetical protein; InterPro IPR011008:IPR007138; KEGG: bth:BT_1428 hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: Q8A7U6 Putative uncharacterized protein; PFAM: Antibiotic biosynthesis monooxygenase.
       0.480
ADG93656.1
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; COGs: COG0450 Peroxiredoxin; InterProIPR012336:IPR000866:IPR019479:IPR012335:IPR 017936; KEGG: abu:Abu_1879 alkyl hydroperoxide reductase/thiol specific antioxidant; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; SPTR: A8ERJ0 Alkyl hydroperoxide reductase/ Thiol specific antioxidant; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family.
       0.474
ADG92046.1
Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492:IPR011006; KEGG: abu:Abu_0831 two-component response regulator; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; SPTR: A8ET22 Two-component response regulator; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
   
    0.430
Your Current Organism:
Arcobacter nitrofigilis
NCBI taxonomy Id: 572480
Other names: A. nitrofigilis DSM 7299, Arcobacter nitrofigilis DSM 7299, Arcobacter nitrofigilis str. DSM 7299, Arcobacter nitrofigilis strain DSM 7299
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