Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADG93658.1TtrA; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterProIPR009010:IPR006655:IPR006061:IPR006311:IPR 017909; KEGG: wsu:WS0938 TtrA; SPTR: Q7MRY4 TTRA; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1008 aa)    
Predicted Functional Partners:
ADG93659.1
COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: wsu:WS0937 hypothetical protein; PFAM: Polysulphide reductase NrfD; SPTR: Q7MRY5 Putative uncharacterized protein nuoM; PFAM: Polysulphide reductase, NrfD.
 
 0.998
ADG93660.1
4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterProIPR001450:IPR017900:IPR006311:IPR017909:IPR 017896; KEGG: wsu:WS0936 hypothetical protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A1HNC7 4Fe-4S ferredoxin, iron-sulfur binding domain protein.
 0.998
ADG92252.1
MauM/NapG family ferredoxin-type protein; InterPro IPR017896:IPR017900:IPR004494:IPR001450; KEGG: tdn:Suden_1515 quinol dehydrogenase periplasmic component; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: B6BKQ8 MauM/NapG ferredoxin-type protein; TIGRFAM: MauM/NapG family ferredoxin-type protein; PFAM: 4Fe-4S binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; MauM/NapG family ferredoxin-type protein.
 
 
 0.847
ADG93470.1
Cytochrome c class I; InterPro IPR009056:IPR003088; KEGG: abu:Abu_0567 sulfur oxidation protein SoxXA, monoheme cytochrome c subunit; PFAM: cytochrome c class I; SPTR: A8ESB0 Sulfur oxidation protein SoxXA, monoheme cytochrome c subunit; PFAM: Cytochrome c; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
  
 0.771
ADG93471.1
COGs: COG3245 Cytochrome c5; InterPro IPR002323:IPR009056:IPR003088; KEGG: abu:Abu_0566 sulfur oxidation protein SoxCD, diheme cytochrome c subunit; PFAM: cytochrome c class I; SPTR: A8ESA9 Sulfur oxidation protein SoxCD, diheme cytochrome c subunit; PFAM: Cytochrome c.
    
 0.724
ADG92635.1
4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450:IPR017900:IPR017896; KEGG: dps:DP2987 formate dehydrogenase, iron-sulfur chain; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q6AIW4 Probable formate dehydrogenase, iron-sulfur chain; PFAM: 4Fe-4S binding domain.
 
 
 0.707
ADG92628.1
4Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450:IPR000813:IPR017900:IPR017896; KEGG: abu:Abu_1510 formate dehydrogenase, iron-sulfur subunit FdhB; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: A8EUX8 Formate dehydrogenase, iron-sulfur subunit FdhB; PFAM: 4Fe-4S binding domain.
 
 
 0.704
ADG93464.1
5'-Nucleotidase domain protein; COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; InterPro IPR006311:IPR006179:IPR008334; KEGG: abu:Abu_0572 sulfur oxidation protein, sulfate thiol esterase; PFAM: 5'-Nucleotidase domain protein; SPTR: A8ESB5 Sulfur oxidation protein, sulfate thiol esterase; PFAM: 5'-nucleotidase, C-terminal domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; Belongs to the 5'-nucleotidase family.
    
 0.700
ADG93472.1
Oxidoreductase molybdopterin binding protein; COGs: COG2041 Sulfite oxidase; InterProIPR008335:IPR000572:IPR014756:IPR005066:IPR 006311:IPR017909; KEGG: abu:Abu_0565 sulfur oxidation protein SoxCD, sulfur dehydrogenase subunit; PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; SPTR: A8ESA8 Sulfur oxidation protein SoxCD, sulfur dehydrogenase subunit; PFAM: Mo-co oxidoreductase dimerisation domain; Oxidoreductase molybdopterin binding domain.
    
 0.662
ADG93468.1
InterPro IPR014880; KEGG: abu:Abu_0569 sulfur oxidation protein SoxYZ, sulfur compound chelating protein; PFAM: Sulphur oxidation protein SoxZ; SPTR: A8ESB2 Sulfur oxidation protein SoxYZ, sulfur compound chelating protein; PFAM: Sulphur oxidation protein SoxZ.
     
 0.659
Your Current Organism:
Arcobacter nitrofigilis
NCBI taxonomy Id: 572480
Other names: A. nitrofigilis DSM 7299, Arcobacter nitrofigilis DSM 7299, Arcobacter nitrofigilis str. DSM 7299, Arcobacter nitrofigilis strain DSM 7299
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