Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADG93805.1Hypothetical protein. (44 aa)    
Predicted Functional Partners:
ADG93804.1
KEGG: wbr:WGLp017 hypothetical protein; SPTR: Q8D3I4 Imp protein.
       0.773
ADG93806.1
Hypothetical protein.
       0.773
ADG93807.1
KEGG: abu:Abu_0491 hypothetical protein; SPTR: A8ES42 Putative uncharacterized protein.
       0.737
ADG93802.1
KEGG: abu:Abu_0491 hypothetical protein; SPTR: A8ES42 Putative uncharacterized protein.
       0.645
ADG93803.1
Hypothetical protein.
       0.645
ADG93801.1
Hypothetical protein.
       0.598
Your Current Organism:
Arcobacter nitrofigilis
NCBI taxonomy Id: 572480
Other names: A. nitrofigilis DSM 7299, Arcobacter nitrofigilis DSM 7299, Arcobacter nitrofigilis str. DSM 7299, Arcobacter nitrofigilis strain DSM 7299
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