STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG93828.1KEGG: bcm:Bcenmc03_4031 hypothetical protein; SPTR: B6BHY1 Putative uncharacterized protein. (89 aa)    
Predicted Functional Partners:
ADG93827.1
Protein of unknown function DUF423; COGs: COG2363 Uncharacterized small membrane protein; InterPro IPR006696; KEGG: abu:Abu_0866 hypothetical protein; PFAM: protein of unknown function DUF423; SPTR: A8ET52 Conserved hypothetical membrane protein (DUF423); PFAM: Protein of unknown function (DUF423).
       0.630
ADG93829.1
COGs: COG2236 phosphoribosyltransferase; InterPro IPR000836; KEGG: abu:Abu_0867 putative nucleotide phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: A8ET53 Putative nucleotide phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain.
       0.591
ADG93830.1
COGs: COG2252 Permease; InterPro IPR006043; KEGG: tcx:Tcr_0399 xanthine/uracil/vitamin C permease; PFAM: Xanthine/uracil/vitamin C permease; SPTR: Q31IM8 Nucleobase:cation symporter-2 (NCS2) family transporter; PFAM: Permease family.
       0.590
ADG93826.1
Protein of unknown function DUF520; COGs: COG1666 conserved hypothetical protein; InterPro IPR007551; KEGG: abu:Abu_0864 hypothetical protein; PFAM: protein of unknown function DUF520; SPTR: A8ET50 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF520); Belongs to the UPF0234 family.
       0.456
ADG93824.1
COGs: COG0642 Signal transduction histidine kinase; InterProIPR003661:IPR003594:IPR009082:IPR004358:IPR 005467; KEGG: abu:Abu_0061 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: A8EQX2 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
       0.440
ADG93825.1
Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR011006:IPR001867:IPR011991; KEGG: sun:SUN_0788 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; SPTR: A6Q8D7 Two-component response regulator; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
       0.440
ADG93831.1
Protein of unknown function DUF89; COGs: COG1578 conserved hypothetical protein; InterPro IPR002791:IPR014444; KEGG: tdn:Suden_1861 hypothetical protein; PFAM: protein of unknown function DUF89; SPTR: B6BI22 Putative uncharacterized protein; PFAM: Protein of unknown function DUF89.
       0.402
Your Current Organism:
Arcobacter nitrofigilis
NCBI taxonomy Id: 572480
Other names: A. nitrofigilis DSM 7299, Arcobacter nitrofigilis DSM 7299, Arcobacter nitrofigilis str. DSM 7299, Arcobacter nitrofigilis strain DSM 7299
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.