STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG93863.1COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR016039:IPR016035:IPR016040:IPR009081:IPR 014030:IPR014031:IPR014043:IPR013968:IPR006163:IPR016038:I PR001227; KEGG: npu:Npun_R3024 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; Acyl transferase; KR domain protein; phosphopantetheine-binding; SPTR: Q6E7J4 JamP; PFAM: Phosphopantetheine attachment site; Acyl transferase domain; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain. (1557 aa)    
Predicted Functional Partners:
ADG93864.1
Amino acid adenylation domain protein; COGs: COG1020 Non-ribosomal peptide synthetase modules and related protein; InterProIPR010071:IPR009081:IPR020459:IPR001242:IPR 013624:IPR000873:IPR006163:IPR020845; KEGG: npu:Npun_CR074 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; Non-ribosomal peptide synthetase; phosphopantetheine-binding; SPTR: Q8GAQ3 BarG; TIGRFAM: amino acid adenylation domain protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme; Condensation domain; Nonribosomal peptide synthase; T [...]
 
 0.997
ADG93861.1
COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR009081:IPR000873; KEGG: cyc:PCC7424_1874 beta-ketoacyl synthase; PFAM: AMP-dependent synthetase and ligase; SPTR: B4VZJ3 AMP-binding enzyme domain protein; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme.
 0.996
ADG93862.1
Amino acid adenylation domain protein; COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR010071:IPR016039:IPR016035:IPR016040:IPR 009081:IPR016036:IPR014030:IPR014031:IPR013968:IPR006163:I PR014043:IPR001242:IPR013624:IPR000873:IPR016038:IPR001227 :IPR020845:IPR018201; KEGG: cce:Ccel_0979 amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Beta-ketoacyl synthase; KR domain protein; phosphopantetheine-binding; Acyl transferase; condensation domain protein; Non-ribosomal peptide synthetase; SPTR: A3INX3 Non-ribosomal peptide synthase/ [...]
 
 
0.988
ADG93865.1
Amino acid adenylation domain protein; COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR010071:IPR016039:IPR016035:IPR016040:IPR 009081:IPR016036:IPR014030:IPR014031:IPR014043:IPR013217:I PR013968:IPR006163:IPR001242:IPR013624:IPR000873:IPR001031 :IPR016038:IPR001227:IPR006162:IPR020845:IPR018201; KEGG: pmr:PMI2600 non-ribosomal peptide synthase (siderophore synthase); PFAM: AMP-dependent synthetase and ligase; Beta-ketoacyl synthase; Acyl transferase; Methyltransferase type 12; KR domain protein; phosphopantetheine-binding; condensation domain protein; Non-rib [...]
 
 
0.987
ADG93866.1
Oleoyl-(acyl-carrier-protein) hydrolase; COGs: COG3208 thioesterase involved in non-ribosomal peptide biosynthesis; InterPro IPR001031; KEGG: bbe:BBR47_28880 putative type II thioesterase; PFAM: Thioesterase; PRIAM: Oleoyl-[acyl-carrier-protein] hydrolase; SPTR: Q8G988 Microcystin synthetase associated thioesterase; PFAM: Thioesterase domain.
  
 0.985
ADG93868.1
COGs: COG2091 Phosphopantetheinyl transferase; InterPro IPR008278; KEGG: ter:Tery_4684 phosphopantethiene-protein transferase; PFAM: 4'-phosphopantetheinyl transferase; SPTR: Q10VS6 Phosphopantethiene-protein transferase; PFAM: 4'-phosphopantetheinyl transferase superfamily; Belongs to the P-Pant transferase superfamily.
 
 
 0.966
ADG93551.1
COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: sun:SUN_1088 hypothetical protein; PFAM: AMP-dependent synthetase and ligase; SPTR: B6BJF6 AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme.
 0.933
hemL
Glutamate-1-semialdehyde-2,1-aminomutase; COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR005814:IPR015421:IPR004639:IPR015424; KEGG: abu:Abu_1006 glutamate-1-semialdehyde aminotransferase; PFAM: aminotransferase class-III; SPTR: A8ETJ2 Glutamate-1-semialdehyde 2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase.
    
 0.880
ADG93867.1
COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterProIPR010085:IPR011032:IPR016040:IPR013154:IPR 013149; KEGG: nca:Noca_1795 crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: Q53865 Crotonyl CoA reductase; TIGRFAM: crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: crotonyl-CoA reductase.
 
 
 0.815
ADG91763.1
Thioesterase superfamily protein; COGs: COG0824 thioesterase; InterPro IPR006683; KEGG: abu:Abu_0023 hypothetical protein; PFAM: thioesterase superfamily protein; SPTR: A8EQS1 Putative uncharacterized protein; PFAM: Thioesterase superfamily.
  
 
 0.778
Your Current Organism:
Arcobacter nitrofigilis
NCBI taxonomy Id: 572480
Other names: A. nitrofigilis DSM 7299, Arcobacter nitrofigilis DSM 7299, Arcobacter nitrofigilis str. DSM 7299, Arcobacter nitrofigilis strain DSM 7299
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