Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Score
ADG93931.1Protein of unknown function DUF808; COGs: COG2354 conserved hypothetical protein; InterPro IPR008526; KEGG: tdn:Suden_1370 hypothetical protein; PFAM: protein of unknown function DUF808; SPTR: Q30QT4 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF808). (286 aa)    
Predicted Functional Partners:
ADG93930.1
COGs: COG0035 Uracil phosphoribosyltransferase; InterPro IPR005765:IPR000836; KEGG: pmx:PERMA_1366 uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Uracil phosphoribosyltransferase; SPTR: B6BGG7 Uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase; Belongs to the UPRTase family.
       0.636
mltG
Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.
   
    0.481
ADG93929.1
COGs: COG2233 Xanthine/uracil permease; InterPro IPR006042:IPR006043; KEGG: wsu:WS0203 uracil permease; PFAM: Xanthine/uracil/vitamin C permease; SPTR: C2A016 Uracil-xanthine permease; TIGRFAM: uracil-xanthine permease; PFAM: Permease family; TIGRFAM: uracil-xanthine permease.
       0.446
ADG93958.1
Ribonuclease BN; COGs: COG1295 membrane protein; InterPro IPR017039:IPR004664; KEGG: abu:Abu_1841 tRNA-processing ribonuclease BN; PFAM: ribonuclease BN; SPTR: A8EVV8 tRNA-processing ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN).
   
    0.413
Your Current Organism:
Arcobacter nitrofigilis
NCBI taxonomy Id: 572480
Other names: A. nitrofigilis DSM 7299, Arcobacter nitrofigilis DSM 7299, Arcobacter nitrofigilis str. DSM 7299, Arcobacter nitrofigilis strain DSM 7299
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