close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG94076.1Rubredoxin-type Fe(Cys)4 protein; COGs: COG1773 Rubredoxin; InterPro IPR004039:IPR018527:IPR001052; KEGG: sun:SUN_1757 rubredoxin; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: A6QB45 Rubredoxin; PFAM: Rubredoxin. (54 aa)    
Predicted Functional Partners:
ADG91705.1
COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterPro IPR001821:IPR013027:IPR007419:IPR006137; KEGG: sun:SUN_1652 Ni-Fe hydrogenase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; NADH ubiquinone oxidoreductase 20 kDa subunit; SPTR: B6BMJ6 Quinone-reactive Ni/Fe-hydrogenase small chain; TIGRFAM: hydrogenase (NiFe) small subunit HydA; PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH ubiquinone oxidoreductase, 20 Kd subunit; BFD-like [2Fe-2S] binding domain; TIGRFAM: hydrogenase (NiFe) sma [...]
  
 
 0.979
ADG92062.1
Nitrite reductase (NAD(P)H), large subunit; COGs: COG1251 NAD(P)H-nitrite reductase; InterProIPR006066:IPR012744:IPR013027:IPR017121:IPR 005117:IPR007419:IPR006067; KEGG: hna:Hneap_1114 nitrite reductase (NAD(P)H), large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; SPTR: C0N4M3 Nitrite reductase (NAD(P)H), large subunit; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: P [...]
  
 
 0.931
ADG93531.1
InterPro IPR007419; KEGG: abu:Abu_1252 hypothetical protein; PFAM: BFD domain protein [2Fe-2S]-binding domain protein; SPTR: A8EU85 Putative uncharacterized protein; PFAM: BFD-like [2Fe-2S] binding domain.
  
 
 0.910
ADG94075.1
Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily.
       0.777
ADG94073.1
Protein of unknown function DUF344; COGs: COG2326 conserved hypothetical protein; InterPro IPR016898:IPR005660; KEGG: abu:Abu_1703 hypothetical protein; PFAM: protein of unknown function DUF344; SPTR: A8EVH7 Putative uncharacterized protein; PFAM: Polyphosphate kinase 2 (PPK2).
       0.723
ADG94074.1
Protein of unknown function DUF344; COGs: COG2326 conserved hypothetical protein; InterPro IPR016898:IPR005660; KEGG: abu:Abu_1704 hypothetical protein; PFAM: protein of unknown function DUF344; SPTR: A8EVH8 Putative uncharacterized protein; PFAM: Polyphosphate kinase 2 (PPK2).
       0.723
ADG93774.1
Rubrerythrin; COGs: COG1592 Rubrerythrin; InterProIPR004462:IPR009078:IPR003251:IPR009040:IPR 012347:IPR004039; KEGG: sun:SUN_1880 rubrerythrin; PFAM: Rubrerythrin; Desulfoferrodoxin Dfx domain protein; SPTR: A6QBG8 Rubrerythrin; PFAM: Rubrerythrin; Desulfoferrodoxin, N-terminal domain; TIGRFAM: desulfoferrodoxin FeS4 iron-binding domain.
 
  
 0.690
ADG91747.1
Flavodoxin/nitric oxide synthase; COGs: COG0426 flavoprotein; InterPro IPR016440:IPR008254; KEGG: dar:Daro_1451 beta-lactamase-like:flavodoxin/nitric oxide synthase; PFAM: flavodoxin/nitric oxide synthase; SPTR: Q47G31 Beta-lactamase-like:Flavodoxin/nitric oxide synthase; PFAM: Metallo-beta-lactamase superfamily; Flavodoxin.
 
  
 0.637
ADG92889.1
Ferroxidase; Iron-storage protein.
  
  
 0.528
ADG94077.1
COGs: COG1748 Saccharopine dehydrogenase and related protein; InterPro IPR016040:IPR005097; KEGG: abu:Abu_1706 saccharopine dehydrogenase (L-lysine-forming); PFAM: Saccharopine dehydrogenase; SPTR: A8EVI0 Saccharopine dehydrogenase (L-lysine-forming); PFAM: Saccharopine dehydrogenase.
       0.520
Your Current Organism:
Arcobacter nitrofigilis
NCBI taxonomy Id: 572480
Other names: A. nitrofigilis DSM 7299, Arcobacter nitrofigilis DSM 7299, Arcobacter nitrofigilis str. DSM 7299, Arcobacter nitrofigilis strain DSM 7299
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.