STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG94105.1KEGG: mac:MA3805 hypothetical protein; SPTR: Q8TJH9 Putative uncharacterized protein. (158 aa)    
Predicted Functional Partners:
ADG94104.1
KEGG: hypothetical protein; SPTR: Q0Q0I3 TatC.
       0.773
ADG94103.1
Protein of unknown function DUF1568; InterPro IPR011462; KEGG: tdn:Suden_1725 hypothetical protein; PFAM: protein of unknown function DUF1568; SPTR: Q30PT2 Putative uncharacterized protein; PFAM: Transposase IS200 like.
       0.490
panB
3-methyl-2-oxobutanoatehydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
       0.465
ruvB
Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
       0.465
ADG94108.1
Protein of unknown function UPF0118; COGs: COG0628 permease; InterPro IPR002549; KEGG: abu:Abu_1777 acid membrane antigen A; PFAM: protein of unknown function UPF0118; SPTR: A8EVQ0 Acid membrane antigen A; PFAM: Domain of unknown function DUF20.
       0.465
ADG92232.1
InterPro IPR016866; KEGG: aha:AHA_3434 TonB system biopolymer transport component; SPTR: A0KNS2 TonB system biopolymer transport component; PFAM: Protein of unknown function (DUF3450).
  
 
 0.446
Your Current Organism:
Arcobacter nitrofigilis
NCBI taxonomy Id: 572480
Other names: A. nitrofigilis DSM 7299, Arcobacter nitrofigilis DSM 7299, Arcobacter nitrofigilis str. DSM 7299, Arcobacter nitrofigilis strain DSM 7299
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.