STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG94450.1Protein of unknown function DUF411; COGs: COG3019 metal-binding protein; InterPro IPR007332; KEGG: cco:CCC13826_1707 hypothetical protein; PFAM: protein of unknown function DUF411; SPTR: A7ZFU9 CopG protein; PFAM: Protein of unknown function, DUF. (132 aa)    
Predicted Functional Partners:
ADG94451.1
ABC transporter related protein; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR017871:IPR003439:IPR003593; KEGG: pat:Patl_1866 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q15UQ2 ABC transporter related; PFAM: ABC transporter.
       0.773
ADG94452.1
Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: cps:CPS_1929 putative sulfonate ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Q483V7 Putative sulfonate ABC transporter, permease protein; PFAM: Binding-protein-dependent transport system inner membrane component.
       0.773
ADG94453.1
COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: cps:CPS_1928 putative sulfonate ABC transporter, periplasmic sulfonate-binding protein; SPTR: Q483V8 Putative sulfonate ABC transporter, periplasmic sulfonate-binding protein; PFAM: NMT1/THI5 like.
       0.773
ADG94454.1
Cytochrome c550; InterPro IPR009056; KEGG: mch:Mchl_1538 cytochrome c550; SPTR: C5AXV6 Putative cytochrome c550; PFAM: Cytochrome c.
       0.532
ADG94455.1
Extracellular solute-binding protein family 3; COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR018313:IPR001638; KEGG: swd:Swoo_2256 hypothetical protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: Q2BNS3 Putative uncharacterized protein; PFAM: Bacterial extracellular solute-binding proteins, family 3.
       0.525
ADG94456.1
KEGG: pmy:Pmen_1960 hypothetical protein; SPTR: A4XTQ5 Putative uncharacterized protein; PFAM: Sulphur oxidation protein SoxZ.
       0.514
ADG94457.1
Beta-lactamase; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: dar:Daro_1026 beta-lactamase-like; SPTR: Q47H99 Beta-lactamase-like; PFAM: Metallo-beta-lactamase superfamily.
       0.514
Your Current Organism:
Arcobacter nitrofigilis
NCBI taxonomy Id: 572480
Other names: A. nitrofigilis DSM 7299, Arcobacter nitrofigilis DSM 7299, Arcobacter nitrofigilis str. DSM 7299, Arcobacter nitrofigilis strain DSM 7299
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