STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG94601.1UDP-N-acetylglucosamine 4,6-dehydratase; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR020025:IPR016040:IPR003869; KEGG: abu:Abu_2243 UDP GlcNAc dehydratase/reductase PseB, putative; PFAM: polysaccharide biosynthesis protein CapD; SPTR: A8EWY3 UDP GlcNAc dehydratase/reductase PseB, putative; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase; PFAM: Polysaccharide biosynthesis protein; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase. (330 aa)    
Predicted Functional Partners:
ADG94600.1
UDP-4-keto-6-deoxy-N-acetylglucosamine4-aminotra nsferase; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterProIPR000653:IPR020026:IPR015421:IPR015422:IPR 015424; KEGG: abu:Abu_2244 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: A8EWY4 DegT/DnrJ/EryC1/StrS aminotransferase; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; Belongs to the DegT/ [...]
 
 
 0.995
ADG94598.1
COGs: COG2089 Sialic acid synthase; InterProIPR020030:IPR013785:IPR006190:IPR013132:IPR 013974; KEGG: abu:Abu_2246 N-acetylneuraminic acid synthetase; PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; PRIAM: N-acylneuraminate-9-phosphate synthase; SPTR: A8EWY6 N-acetylneuraminic acid synthetase; TIGRFAM: pseudaminic acid synthase; PFAM: SAF domain; NeuB family; TIGRFAM: pseudaminic acid synthase.
 
  
 0.945
ADG94599.1
Pseudaminic acid CMP-transferase; COGs: COG1083 CMP-N-acetylneuraminic acid synthetase; InterPro IPR020039:IPR003329; KEGG: abu:Abu_2245 acylneuraminate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; SPTR: A8EWY5 Acylneuraminate cytidylyltransferase; TIGRFAM: pseudaminic acid CMP-transferase; PFAM: Cytidylyltransferase; TIGRFAM: pseudaminic acid CMP-transferase.
 
  
 0.944
ADG94597.1
Glycosyltransferase; COGs: COG3980 Spore coat polysaccharide biosynthesis protein predicted glycosyltransferase; KEGG: abu:Abu_2247 glycosyltransferase; SPTR: A8EWY7 Glycosyltransferase; PFAM: Glycosyltransferase family 28 C-terminal domain.
 
   
 0.943
ADG94219.1
Nucleotide sugar dehydrogenase; COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterProIPR016040:IPR014027:IPR008927:IPR017476:IPR 001732:IPR014026; KEGG: abu:Abu_0661 UDP-hexose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; SPTR: A8ESK2 UDP-hexose dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydroge [...]
  
 
 0.929
glmU
UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.
    
 0.916
murA
UDP-N-acetylglucosamine1- carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
    
 0.911
ADG94596.1
InterPro IPR015424; KEGG: abu:Abu_2248 hypothetical protein; SPTR: A8EWY8 Putative uncharacterized protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.828
lpxA
acyl-(acyl-carrier-protein)--UDP-N-acetylglucosa mineO-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
    
  0.813
flgI
Flagellar P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
  
 0.787
Your Current Organism:
Arcobacter nitrofigilis
NCBI taxonomy Id: 572480
Other names: A. nitrofigilis DSM 7299, Arcobacter nitrofigilis DSM 7299, Arcobacter nitrofigilis str. DSM 7299, Arcobacter nitrofigilis strain DSM 7299
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