STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO81827.1COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: fnu:FN0543 lipopolysaccharide heptosyltransferase-1; PFAM: glycosyl transferase family 9; SPTR: A5TXF4 LPS heptosyltransferase II; PFAM: Glycosyltransferase family 9 (heptosyltransferase). (345 aa)    
Predicted Functional Partners:
ADO81828.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fnu:FN0542 beta 1,4 glucosyltransferase; PFAM: glycosyl transferase family 2; SPTR: C6JLQ2 Beta 1,4 glucosyltransferase; PFAM: Glycosyl transferase family 2.
  
 0.971
ADO81826.1
COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: fnu:FN0544 ADP-heptose:LPS heptosyltransferase II; PFAM: glycosyl transferase family 9; SPTR: C6JLQ4 LPS heptosyltransferase II; PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II.
 
    
0.842
ADO81937.1
COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: fnu:FN0546 lipopolysaccharide core biosynthesis protein RfaQ; PFAM: glycosyl transferase family 9; SPTR: C6JLQ6 Lipopolysaccharide core biosynthesis protein rfaq; PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II.
 
     0.778
ADO83590.1
rfaE bifunctional protein; COGs: COG2870 ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase; InterPro IPR011611:IPR011913; KEGG: fnu:FN1786 ADP-heptose synthase; PFAM: PfkB domain protein; SPTR: C3W9H3 ADP-heptose synthase; TIGRFAM: rfaE bifunctional protein; PFAM: pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain I.
 
  
 0.730
ADO82396.1
Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184; KEGG: fnu:FN1911 outer membrane protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; SPTR: C6JKV6 OmpIP family outer membrane porin; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein.
 
   
 0.672
ADO83052.1
TPR repeat-containing protein; InterPro IPR011990:IPR001440:IPR019734:IPR013026; KEGG: fnu:FN1836 TPR repeat-containing protein; PFAM: TPR repeat-containing protein; SPTR: C3WC18 Tetratricopeptide repeat family protein.
  
     0.631
ADO83193.1
rfaE bifunctional protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.
 
  
 0.621
ADO82617.1
COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960; KEGG: fnu:FN1016 lipid A biosynthesis lauroyl acyltransferase; PFAM: lipid A biosynthesis acyltransferase; SPTR: C6JM55 Lauroyl acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase.
 
   
 0.594
ADO82093.1
Nucleoside-specific channel-forming protein, Tsx; COGs: COG3248 Nucleoside-binding outer membrane protein; InterPro IPR003055:IPR018013; KEGG: csa:Csal_0110 nucleoside-specific channel-forming protein, Tsx; PFAM: Nucleoside-specific channel-forming protein, Tsx-like; SPTR: Q1R1D4 Nucleoside-specific channel-forming protein, Tsx; PFAM: Nucleoside-specific channel-forming protein, Tsx.
  
     0.569
ADO83304.1
Hypothetical protein; InterPro IPR011009; KEGG: xcv:XCV3547 serine/threonine protein kinase; SPTR: C6JHX7 Putative uncharacterized protein.
  
 
 0.567
Your Current Organism:
Ilyobacter polytropus
NCBI taxonomy Id: 572544
Other names: I. polytropus DSM 2926, Ilyobacter polytropus DSM 2926, Ilyobacter polytropus str. DSM 2926, Ilyobacter polytropus strain DSM 2926
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.