STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO81835.1Ferric uptake regulator, Fur family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: fnu:FN2045 ferric uptake regulation protein; PFAM: ferric-uptake regulator; SPTR: C6JLP9 Ferric uptake regulation protein; PFAM: Ferric uptake regulator family; Belongs to the Fur family. (139 aa)    
Predicted Functional Partners:
ADO81834.1
Ferroxidase; Iron-storage protein.
    
 0.893
ADO83305.1
Rubrerythrin; COGs: COG1592 Rubrerythrin; InterProIPR004039:IPR003251:IPR012347:IPR009078:IPR 009040; KEGG: cdl:CDR20291_1373 putative rubrerythrin; PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; SPTR: C3WA01 Putative uncharacterized protein; PFAM: Rubrerythrin.
  
  
 0.694
ADO81833.1
Rubrerythrin; COGs: COG1592 Rubrerythrin; InterProIPR004039:IPR009040:IPR012347:IPR009078:IPR 003251; KEGG: dae:Dtox_2716 rubrerythrin; PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; SPTR: C6JI88 Rubrerythrin; PFAM: Rubrerythrin.
  
  
 0.683
ADO81832.1
Rubredoxin-type Fe(Cys)4 protein; COGs: COG1773 Rubredoxin; InterPro IPR004039:IPR018527:IPR001052; KEGG: hor:Hore_22490 rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: C4C708 Rubredoxin; PFAM: Rubredoxin.
  
  
 0.645
ADO81831.1
Rubredoxin-type Fe(Cys)4 protein; COGs: COG1773 Rubredoxin; InterPro IPR004039:IPR018527:IPR001052; KEGG: tme:Tmel_0414 rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: C4C708 Rubredoxin; PFAM: Rubredoxin.
  
  
 0.610
ADO82737.1
Putative transcriptional regulator; KEGG: cpr:CPR_0880 hypothetical protein; SPTR: Q0SUK2 Putative uncharacterized protein; PFAM: HTH domain.
  
    0.564
ADO81830.1
Rubredoxin-type Fe(Cys)4 protein; COGs: COG1773 Rubredoxin; InterPro IPR004039:IPR018527:IPR001052; KEGG: tme:Tmel_0414 rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: C4C708 Rubredoxin; PFAM: Rubredoxin.
  
  
 0.561
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.558
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
 
 0.555
sigA
RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
  
 
 0.555
Your Current Organism:
Ilyobacter polytropus
NCBI taxonomy Id: 572544
Other names: I. polytropus DSM 2926, Ilyobacter polytropus DSM 2926, Ilyobacter polytropus str. DSM 2926, Ilyobacter polytropus strain DSM 2926
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.