STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO81863.1COGs: COG2721 Altronate dehydratase; InterPro IPR007392; KEGG: chy:CHY_1256 UxaA family hydrolase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; PRIAM: Altronate dehydratase; SPTR: Q3ACP4 Hydrolase, UxaA family; PFAM: D-galactarate dehydratase / Altronate hydrolase, C terminus. (386 aa)    
Predicted Functional Partners:
ADO81862.1
SAF domain protein; InterPro IPR013974; KEGG: chy:CHY_1255 UxaA family hydrolase; PFAM: SAF domain protein; SPTR: Q3ACP5 Hydrolase, UxaA family; PFAM: SAF domain.
 
  
  0.991
kdgT
2-keto-3-deoxygluconate permease; The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system. Belongs to the KdgT transporter family.
 
    0.837
ADO82786.1
COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR003500:IPR004785; KEGG: fnu:FN1874 ribose 5-phosphate isomerase; PFAM: Ribose/galactose isomerase; PRIAM: Galactose-6-phosphate isomerase; SPTR: C6JLT4 Ribose 5-phosphate isomerase; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family.
    
 0.812
ADO83097.1
COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056:IPR011060:IPR013785; KEGG: fnu:FN0680 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: C6JKN5 Ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase.
     
 0.800
ADO81865.1
Type III effector Hrp-dependent outers domain protein; COGs: COG3395 conserved hypothetical protein; InterPro IPR010737; KEGG: chy:CHY_1258 hypothetical protein; PFAM: type III effector Hrp-dependent outers; SPTR: Q3ACP2 Putative uncharacterized protein; PFAM: Protein of unknown function, DUF1537.
 
     0.676
ADO81866.1
4-hydroxythreonine-4-phosphate dehydrogenase; COGs: COG1995 Pyridoxal phosphate biosynthesis protein; InterPro IPR005255; KEGG: oih:OB1013 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; PRIAM: 4-hydroxythreonine-4-phosphate dehydrogenase; SPTR: C6JJI6 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; Belongs to the PdxA family.
       0.591
ADO81867.1
Regulatory protein GntR HTH; COGs: COG2186 Transcriptional regulators; InterPro IPR000524:IPR011991:IPR011711; KEGG: cno:NT01CX_1608 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; SPTR: A0PZ87 Transcriptional regulator, GntR family, putative; PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
     
 0.508
ADO81860.1
COGs: COG0684 Demethylmenaquinone methyltransferase; InterPro IPR005493; KEGG: dds:Ddes_2380 dimethylmenaquinone methyltransferase; PFAM: Dimethylmenaquinone methyltransferase; SPTR: A8S131 Putative uncharacterized protein; PFAM: Demethylmenaquinone methyltransferase.
       0.404
Your Current Organism:
Ilyobacter polytropus
NCBI taxonomy Id: 572544
Other names: I. polytropus DSM 2926, Ilyobacter polytropus DSM 2926, Ilyobacter polytropus str. DSM 2926, Ilyobacter polytropus strain DSM 2926
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