STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO81872.1TRAP dicarboxylate transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681:IPR010656; KEGG: chy:CHY_1303 TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: C0FJ75 Putative uncharacterized protein; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit. (421 aa)    
Predicted Functional Partners:
ADO81870.1
TRAP dicarboxylate transporter, DctP subunit; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR004682:IPR018389; KEGG: chy:CHY_1301 TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: C0FJ77 Putative uncharacterized protein; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family.
  
 0.991
ADO81889.1
TRAP dicarboxylate transporter, DctP subunit; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR004682:IPR018389; KEGG: vex:VEA_000634 TRAP-type C4-dicarboxylate transport system component; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: A6C4S8 C4-dicarboxylate transport system (C4-dicarboxylate-binding protein); TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family.
  
 0.981
ADO81871.1
Tripartite ATP-independent periplasmic transporter DctQ component; COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: bha:BH2672 C4-dicarboxylate transport system (permease small protein); PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: C0FJ76 Putative uncharacterized protein; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component.
 
 
 0.980
ADO81887.1
Tripartite ATP-independent periplasmic transporter DctQ component; COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: bha:BH3392 C4-dicarboxylate transport system (permease small protein); PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: C1TQL5 TRAP-type C4-dicarboxylate transport system, small permease component; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component.
 
 
 0.726
ADO81869.1
KEGG: bur:Bcep18194_B2408 hypothetical protein; SPTR: C0FJ78 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2848).
       0.571
ADO81868.1
COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: aoe:Clos_1009 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: A8MG18 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Carbon-nitrogen hydrolase.
  
    0.556
ADO81873.1
Transcriptional regulator, GntR family; COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR011991:IPR011711; KEGG: mta:Moth_0073 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: C0FJ81 Putative uncharacterized protein; PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
  
    0.516
Your Current Organism:
Ilyobacter polytropus
NCBI taxonomy Id: 572544
Other names: I. polytropus DSM 2926, Ilyobacter polytropus DSM 2926, Ilyobacter polytropus str. DSM 2926, Ilyobacter polytropus strain DSM 2926
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