STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO82170.1Secretion protein HlyD family protein; InterPro IPR011053:IPR006143; KEGG: cth:Cthe_1762 RND family efflux transporter MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: C3WFN2 Predicted protein; TIGRFAM: RND family efflux transporter, MFP subunit. (442 aa)    
Predicted Functional Partners:
ADO82169.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: fnu:FN1273 outer membrane protein TolC; PFAM: outer membrane efflux protein; SPTR: C3WFN1 Predicted protein; PFAM: Outer membrane efflux protein.
 
 
 0.830
ADO83008.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: pca:Pcar_3003 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: C6JPM1 Predicted protein; PFAM: Outer membrane efflux protein.
 
 
 0.739
ADO82172.1
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: dat:HRM2_05830 putative macrolipide-specific ABC-type efflux carrier (MacA conjunction protein); PFAM: protein of unknown function DUF214; SPTR: C3WFN3 Predicted protein; PFAM: Predicted permease.
 
  
 0.737
ADO82608.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: fnu:FN1273 outer membrane protein TolC; PFAM: outer membrane efflux protein; SPTR: C3WFN1 Predicted protein; PFAM: Outer membrane efflux protein.
 
 
 0.730
ADO82660.1
Hypothetical protein; KEGG: fnu:FN0825 putative cytoplasmic protein; SPTR: C3WCA7 Putative uncharacterized protein.
  
 
 0.668
ADO82911.1
RND efflux system, outer membrane lipoprotein, NodT family; COGs: COG1538 Outer membrane protein; InterPro IPR010131:IPR003423; KEGG: pca:Pcar_3093 outer membrane protein; PFAM: outer membrane efflux protein; SPTR: Q39ZX9 Outer membrane protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
  
 
 0.668
ADO83536.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: fnu:FN1273 outer membrane protein TolC; PFAM: outer membrane efflux protein; SPTR: C6JIA2 Outer membrane protein tolC; PFAM: Outer membrane efflux protein.
  
 
 0.668
ADO82657.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: lba:Lebu_0819 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: C3WCB0 Export abc transporter permease protein; PFAM: Predicted permease.
 
  
 0.618
ADO82171.1
KEGG: ava:Ava_3619 hypothetical protein; SPTR: A3J572 Putative uncharacterized protein.
  
  
 0.605
ADO82578.1
Major facilitator superfamily MFS_1; InterPro IPR011701:IPR016196; KEGG: dth:DICTH_0357 oxalate/formate antiporter; PFAM: major facilitator superfamily MFS_1; SPTR: B5YCI0 Oxalate/formate antiporter; PFAM: Major Facilitator Superfamily.
  
 
 0.562
Your Current Organism:
Ilyobacter polytropus
NCBI taxonomy Id: 572544
Other names: I. polytropus DSM 2926, Ilyobacter polytropus DSM 2926, Ilyobacter polytropus str. DSM 2926, Ilyobacter polytropus strain DSM 2926
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.