STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO82258.1Endoribonuclease L-PSP; COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR013813:IPR006175; KEGG: syf:Synpcc7942_2408 hypothetical protein; PFAM: Endoribonuclease L-PSP; SPTR: Q31KI1 Putative uncharacterized protein; PFAM: Endoribonuclease L-PSP. (130 aa)    
Predicted Functional Partners:
ADO82257.1
FAD dependent oxidoreductase; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: drm:Dred_1730 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: B0MFA8 Putative uncharacterized protein; PFAM: FAD dependent oxidoreductase.
  
  
 0.697
ADO82255.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0492 Thioredoxin reductase; InterPro IPR013027:IPR000103:IPR017896; KEGG: ckr:CKR_1805 hypothetical protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: B0MFB0 Putative uncharacterized protein; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
  
    0.670
ADO82256.1
InterPro IPR007419; KEGG: ckr:CKR_1803 hypothetical protein; PFAM: BFD domain protein [2Fe-2S]-binding domain protein; SPTR: B0MFA9 Putative uncharacterized protein; PFAM: BFD-like [2Fe-2S] binding domain.
       0.668
rph
Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.
  
 
 0.525
ADO82259.1
COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR001670:IPR018211; KEGG: drt:Dret_1261 iron-containing alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; SPTR: C6QU71 Iron-containing alcohol dehydrogenase; PFAM: Iron-containing alcohol dehydrogenase.
  
  
 0.514
ADO82254.1
InterPro IPR001041; KEGG: ckl:CKL_2061 hypothetical protein; SPTR: B0MFB1 Putative uncharacterized protein.
  
    0.401
Your Current Organism:
Ilyobacter polytropus
NCBI taxonomy Id: 572544
Other names: I. polytropus DSM 2926, Ilyobacter polytropus DSM 2926, Ilyobacter polytropus str. DSM 2926, Ilyobacter polytropus strain DSM 2926
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