STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO82289.1Diguanylate cyclase; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: cyc:PCC7424_3092 diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: B7KBD8 Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (465 aa)    
Predicted Functional Partners:
ADO82575.1
Diguanylate phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR001633; KEGG: pfo:Pfl01_4552 response regulator receiver modulated diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein; SPTR: Q3K7G5 Conserved GGDEF/EAL domain protein; PFAM: EAL domain.
  
 0.981
ADO83645.1
Metal dependent phosphohydrolase; COGs: COG2206 HD-GYP domain; InterPro IPR006675:IPR003607:IPR006674; KEGG: chy:CHY_1875 sensory box protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Q3AAY9 Sensory box protein; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG.
 
 0.977
ADO82733.1
Diguanylate phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR003016:IPR001633; KEGG: kko:Kkor_0171 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein; SPTR: C7R6S6 Diguanylate cyclase/phosphodiesterase; PFAM: EAL domain.
  
 0.845
ADO82142.1
Diguanylate cyclase/phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR000160:IPR001633; KEGG: nis:NIS_1205 hypothetical protein; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: A8MM18 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); TIGRFAM: diguanylate cyclase; PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
  
 0.844
ADO82735.1
Diguanylate cyclase/phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR001633:IPR000160; KEGG: kko:Kkor_0171 diguanylate cyclase/phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: C7R6S6 Diguanylate cyclase/phosphodiesterase; PFAM: EAL domain; GGDEF domain.
  
 0.831
ADO83061.1
Diguanylate cyclase/phosphodiesterase; COGs: COG2200 FOG: EAL domain; InterPro IPR001633:IPR000644:IPR000160; KEGG: abu:Abu_0086 EAL/GGDEF domain-containing protein; PFAM: EAL domain protein; CBS domain containing protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: B6BKU3 Cyclic diguanylate phosphodiesterase domain protein; PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
  
 0.819
ADO82110.1
COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789:IPR011006; KEGG: amt:Amet_3227 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: A6TT47 Response regulator receiver protein; PFAM: Response regulator receiver domain; Uncharacterized conserved protein (DUF2294).
    
 0.745
lysS
COGs: COG1190 Lysyl-tRNA synthetase (class II); InterProIPR018149:IPR016027:IPR004365:IPR004364:IPR 006195:IPR012340:IPR002313; KEGG: fnu:FN0466 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: C6JNY6 Lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.664
ADO82290.1
KEGG: ckr:CKR_P13 hypothetical protein; SPTR: B9E6F5 Putative uncharacterized protein.
       0.584
ADO82287.1
Hypothetical protein; InterPro IPR019734:IPR013026:IPR011990; KEGG: fnu:FN0465 hypothetical protein; SPTR: C3WD03 Predicted protein.
       0.582
Your Current Organism:
Ilyobacter polytropus
NCBI taxonomy Id: 572544
Other names: I. polytropus DSM 2926, Ilyobacter polytropus DSM 2926, Ilyobacter polytropus str. DSM 2926, Ilyobacter polytropus strain DSM 2926
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