STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
ADO82536.1Transcriptional regulator, GntR family; COGs: COG2188 Transcriptional regulators; InterPro IPR000524:IPR011663:IPR011991; KEGG: bcl:ABC2077 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: C4BZZ6 Transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain. (240 aa)    
Predicted Functional Partners:
ADO81867.1
Regulatory protein GntR HTH; COGs: COG2186 Transcriptional regulators; InterPro IPR000524:IPR011991:IPR011711; KEGG: cno:NT01CX_1608 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; SPTR: A0PZ87 Transcriptional regulator, GntR family, putative; PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
  
  
 0.782
ADO82535.1
Mannose-6-phosphate isomerase, type 1; COGs: COG1482 Phosphomannose isomerase; InterPro IPR001250:IPR014628:IPR011051:IPR014710; KEGG: lba:Lebu_2134 mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I; SPTR: C6JP17 Mannose-6-phosphate isomerase; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: Phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I.
  
  
 0.775
ADO82771.1
GntR domain protein; COGs: COG2186 Transcriptional regulators; InterPro IPR000524:IPR011991:IPR011711; KEGG: cpf:CPF_0306 FCD domain-containing protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: Q8XNM4 Probable transcriptional regulator; PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
  
  
 0.681
ADO82932.1
Transcriptional regulator, IclR family; COGs: COG1414 Transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: bbe:BBR47_26450 transcriptional regulator; PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; SPTR: C0ZCW3 Transcriptional regulator; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator.
  
  
 0.614
ADO82560.1
Transcriptional regulator, XRE family; InterPro IPR001387:IPR013096:IPR011051:IPR014710; KEGG: cbe:Cbei_1256 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; SPTR: A6LSV7 Helix-turn-helix domain protein; PFAM: Cupin domain; Helix-turn-helix.
  
  
 0.609
ADO82913.1
PTS system D-glucose-specific IIB, IIC, IIA components, Glc family; COGs: COG1263 Phosphotransferase system IIC components glucose/maltose/N-acetylglucosamine-specific; InterProIPR018113:IPR011299:IPR011535:IPR001996:IPR 013013:IPR003352; KEGG: cpf:CPF_2412 PTS system, glucose-specific IIBC component; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; SPTR: C6JPV4 PTS system; TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; [...]
 
  
 0.571
ADO82636.1
COGs: COG2376 Dihydroxyacetone kinase; InterPro IPR004007:IPR012737; KEGG: tte:TTE1996 dihydroxyacetone kinase; PFAM: Dak phosphatase; SPTR: B1CB33 Putative uncharacterized protein; TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: DAK2 domain; TIGRFAM: dihydroxyacetone kinase, phosphoprotein-dependent, L subunit.
 
      0.519
ADO82534.1
COGs: COG4866 conserved hypothetical protein; InterPro IPR016732; KEGG: fnu:FN0277 hypothetical protein; PFAM: Uncharacterised conserved protein UCP018688; SPTR: C6JKC6 Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2156).
       0.514
ADO82263.1
PTS system IIB component, Glc family; COGs: COG1263 Phosphotransferase system IIC components glucose/maltose/N-acetylglucosamine-specific; InterProIPR001996:IPR003352:IPR018113:IPR013013:IPR 019775; KEGG: cbl:CLK_3455 PTS system, maltose/glucose-specfic, IIBC component; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; SPTR: B1KTP1 PTS system, maltose/glucose-specfic, IIBC component; PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component; (TC 4.A.1).
  
  
 0.510
ADO82114.1
Transcriptional regulator, LacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR010982:IPR001761; KEGG: cpf:CPF_2817 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; SPTR: Q0TMF9 Sugar-binding transcriptional regulator, LacI family; PFAM: Bacterial regulatory proteins, lacI family; family.
  
   
 0.504
Your Current Organism:
Ilyobacter polytropus
NCBI taxonomy Id: 572544
Other names: I. polytropus DSM 2926, Ilyobacter polytropus DSM 2926, Ilyobacter polytropus str. DSM 2926, Ilyobacter polytropus strain DSM 2926
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