STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO82561.1Putative RNA methylase; COGs: COG1041 DNA modification methylase; InterPro IPR000241; KEGG: cbe:Cbei_5041 putative RNA methylase; PFAM: putative RNA methylase; SPTR: A6M3G7 Putative RNA methylase; PFAM: Putative RNA methylase family UPF0020. (310 aa)    
Predicted Functional Partners:
ADO82560.1
Transcriptional regulator, XRE family; InterPro IPR001387:IPR013096:IPR011051:IPR014710; KEGG: cbe:Cbei_1256 helix-turn-helix domain-containing protein; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; SPTR: A6LSV7 Helix-turn-helix domain protein; PFAM: Cupin domain; Helix-turn-helix.
  
    0.638
ADO82669.1
Radical SAM domain protein; COGs: COG2108 conserved hypothetical protein related to pyruvate formate-lyase activation; InterPro IPR007197; KEGG: cac:CAC3333 hypothetical protein; PFAM: Radical SAM domain protein; SPTR: Q97DY7 Uncharacterized conserved protein, related to pyruvate formate-lyase activating enzyme; PFAM: Radical SAM superfamily.
  
     0.500
ADO82829.1
DNA methylase N-4/N-6 domain protein; COGs: COG0863 DNA modification methylase; InterProIPR001091:IPR002052:IPR015840:IPR003115:IPR 002941; KEGG: seu:SEQ_0163 phage DNA methylase; PFAM: DNA methylase N-4/N-6 domain protein; ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: C0MBJ3 Phage DNA methylase; PFAM: ParB-like nuclease domain; DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
     
 0.494
ADO82562.1
InterPro IPR018649; KEGG: tcx:Tcr_2112 hypothetical protein; PFAM: Protein of unknown function DUF2078, membrane; SPTR: Q31DS2 Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2078).
       0.422
ADO82559.1
YjlA; KEGG: bld:BLi01973 YjlA; SPTR: C2P113 Putative uncharacterized protein.
       0.407
Your Current Organism:
Ilyobacter polytropus
NCBI taxonomy Id: 572544
Other names: I. polytropus DSM 2926, Ilyobacter polytropus DSM 2926, Ilyobacter polytropus str. DSM 2926, Ilyobacter polytropus strain DSM 2926
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