STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO82719.1Protein of unknown function DUF125 transmembrane; COGs: COG1814 Uncharacterized membrane protein; InterPro IPR009078:IPR008217; KEGG: taf:THA_69 integral membrane protein; PFAM: protein of unknown function DUF125 transmembrane; SPTR: B7IER3 Integral membrane protein; PFAM: VIT family. (288 aa)    
Predicted Functional Partners:
ADO82720.1
Isoamylase; COGs: COG1523 Type II secretory pathway pullulanase PulA and related glycosidase; InterProIPR011837:IPR013783:IPR013781:IPR013780:IPR 006589:IPR017853:IPR014756:IPR004193:IPR006047; KEGG: pmo:Pmob_1750 glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: A9BIV5 Glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: glycogen debranc [...]
     
 0.617
ADO82709.1
Linocin_M18 bacteriocin protein; COGs: COG1659 conserved hypothetical protein; InterPro IPR007544; KEGG: amt:Amet_4421 Linocin_M18 bacteriocin protein; PFAM: Linocin_M18 bacteriocin protein; SPTR: C6JR19 Linocin_M18 bacteriocin protein; PFAM: Encapsulating protein for peroxidase.
 
     0.537
Your Current Organism:
Ilyobacter polytropus
NCBI taxonomy Id: 572544
Other names: I. polytropus DSM 2926, Ilyobacter polytropus DSM 2926, Ilyobacter polytropus str. DSM 2926, Ilyobacter polytropus strain DSM 2926
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