STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO83204.1Peptidase M50; COGs: COG1994 Zn-dependent protease; InterPro IPR008915; KEGG: lba:Lebu_2082 peptidase M50; PFAM: peptidase M50; SPTR: C6JNI8 Peptidase M50; PFAM: Peptidase family M50. (245 aa)    
Predicted Functional Partners:
ADO83202.1
Protein of unknown function UPF0029; COGs: COG1739 conserved hypothetical protein; InterPro IPR020568:IPR001498; KEGG: lba:Lebu_2086 protein of unknown function UPF0029; PFAM: protein of unknown function UPF0029; SPTR: C6JNI9 Thymidylate synthase; PFAM: Uncharacterized protein family UPF0029; TIGRFAM: uncharacterized protein, YigZ family.
       0.797
ADO83203.1
Protein of unknown function UPF0126; COGs: COG2860 membrane protein; InterPro IPR005115; KEGG: sss:SSUSC84_1663 hypothetical protein; PFAM: protein of unknown function UPF0126; SPTR: C4BVY3 Predicted membrane protein, COG2860; PFAM: UPF0126 domain.
       0.773
ADO83205.1
COGs: COG0658 membrane metal-binding protein; InterPro IPR004477; KEGG: fnu:FN0223 ComE operon protein 3; PFAM: ComEC/Rec2-related protein; SPTR: C6JNI7 COME operon protein 3; TIGRFAM: ComEC/Rec2-related protein; PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein.
       0.693
ADO83206.1
COGs: COG0232 dGTP triphosphohydrolase; InterPro IPR006261:IPR006674:IPR003607; KEGG: lmo:lmo2657 deoxyguanosinetriphosphate triphosphohydrolase-like protein; PFAM: metal-dependent phosphohydrolase HD sub domain; PRIAM: dGTPase; SMART: metal-dependent phosphohydrolase HD region; SPTR: A8RXN6 Putative uncharacterized protein; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative.
       0.621
ADO83207.1
Melibiose carrier protein; COGs: COG2211 Na+/melibiose symporter and related transporter; InterPro IPR016196; KEGG: fnu:FN0222 melibiose carrier protein; SPTR: C3WFC4 Melibiose carrier protein; PFAM: Major Facilitator Superfamily.
       0.405
Your Current Organism:
Ilyobacter polytropus
NCBI taxonomy Id: 572544
Other names: I. polytropus DSM 2926, Ilyobacter polytropus DSM 2926, Ilyobacter polytropus str. DSM 2926, Ilyobacter polytropus strain DSM 2926
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