STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO83652.1KEGG: swd:Swoo_3630 OmpA-like transmembrane domain-containing protein. (86 aa)    
Predicted Functional Partners:
ADO83650.1
KEGG: cdl:CDR20291_0895 hypothetical protein; SPTR: B0A868 Putative uncharacterized protein; PFAM: Domain of unknown function DUF83.
       0.531
ADO83651.1
UvrD/REP helicase; COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR014016:IPR014017:IPR000212; KEGG: cth:Cthe_0206 UvrD/REP helicase; PFAM: UvrD/REP helicase; SPTR: A3DBW8 UvrD/REP helicase; PFAM: UvrD/REP helicase.
       0.531
ADO83653.1
Amino acid ABC transporter substrate-binding protein, PAAT family; COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638; KEGG: dhd:Dhaf_3796 extracellular solute-binding protein family 3; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: B8FRQ2 Extracellular solute-binding protein family 3; PFAM: Bacterial extracellular solute-binding proteins, family 3.
       0.521
ADO83654.1
Amino acid ABC transporter membrane protein, PAAT family; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: dhd:Dhaf_3795 polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: B8FRQ1 Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region [...]
       0.441
ADO83655.1
Amino acid ABC transporter ATP-binding protein, PAAT family; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439:IPR003593:IPR017871; KEGG: dsy:DSY2632 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C6MPZ9 ABC transporter related protein; PFAM: ABC transporter.
       0.441
Your Current Organism:
Ilyobacter polytropus
NCBI taxonomy Id: 572544
Other names: I. polytropus DSM 2926, Ilyobacter polytropus DSM 2926, Ilyobacter polytropus str. DSM 2926, Ilyobacter polytropus strain DSM 2926
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