STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADB57230.1KEGG: afr:AFE_3115 hypothetical protein. (136 aa)    
Predicted Functional Partners:
ADB57231.1
Formylmethanofuran--tetrahydromethanopterin N-formyltransferase; PFAM: formylmethanofuran: tetrahydromethanopterin formyltransferase (Ftr); KEGG: bph:Bphy_5933 formylmethanofuran-- tetrahydromethanopterin N-formyltransferase.
       0.693
ADB57229.1
Cellulase; PFAM: peptidase M42 family protein; peptidase M20; KEGG: ecl:EcolC_4119 cellulase.
       0.658
ADB57227.1
Iron (metal) dependent repressor, DtxR family; PFAM: iron dependent repressor; regulatory protein MarR; SMART: iron dependent repressor; KEGG: dal:Dalk_2732 iron (metal) dependent repressor, DtxR family.
       0.473
ADB57228.1
PFAM: FeoA family protein; KEGG: ade:Adeh_3291 hypothetical protein.
       0.473
Your Current Organism:
Archaeoglobus profundus
NCBI taxonomy Id: 572546
Other names: A. profundus DSM 5631, Archaeoglobus profundus DSM 5631, Archaeoglobus profundus str. DSM 5631, Archaeoglobus profundus strain DSM 5631
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.