STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADB58489.1Hypothetical protein. (183 aa)    
Predicted Functional Partners:
ADB58487.1
TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: sat:SYN_01282 23S rRNA Gm2251 methyltransferase.
       0.773
ADB58488.1
PFAM: protein of unknown function DUF6 transmembrane; KEGG: avi:Avi_0392 ABC transporter membrane spanning protein.
       0.773
ADB58490.1
Hypothetical protein.
       0.727
ADB58491.1
PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: csa:Csal_0511 selenophosphate synthase.
       0.664
ADB58492.1
PFAM: PRC-barrel domain protein.
       0.563
ADB58493.1
PFAM: protein of unknown function DUF1614; KEGG: sfu:Sfum_0878 protein of unknown function DUF1614.
       0.563
ADB58485.1
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: similar to CG33048-PC.
       0.554
ADB58486.1
Hypothetical protein.
       0.554
Your Current Organism:
Archaeoglobus profundus
NCBI taxonomy Id: 572546
Other names: A. profundus DSM 5631, Archaeoglobus profundus DSM 5631, Archaeoglobus profundus str. DSM 5631, Archaeoglobus profundus strain DSM 5631
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.