Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| eif1a | rpl13 | Arcpr_0063 | Arcpr_0132 | Translation initiation factor eIF-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.947 |
| eif1a | rpl15e | Arcpr_0063 | Arcpr_0065 | Translation initiation factor eIF-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | PFAM: Ribosomal protein L15e; KEGG: hypothetical protein; K02877 large subunit ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family. | 0.989 |
| eif1a | rpl24 | Arcpr_0063 | Arcpr_1350 | Translation initiation factor eIF-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | Ribosomal protein L24; Located at the polypeptide exit tunnel on the outside of the subunit. | 0.999 |
| eif1a | rpl24e | Arcpr_0063 | Arcpr_0496 | Translation initiation factor eIF-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | Ribosomal protein L24E; Binds to the 23S rRNA. | 0.980 |
| eif1a | rpl30e | Arcpr_0063 | Arcpr_0980 | Translation initiation factor eIF-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: GL20290 gene product from transcript GL20290- RA; Belongs to the eukaryotic ribosomal protein eL30 family. | 0.980 |
| eif1a | rpl31e | Arcpr_0063 | Arcpr_0236 | Translation initiation factor eIF-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | PFAM: Ribosomal protein L31e; KEGG: rpl31; 60S ribosomal protein L31; K02910 large subunit ribosomal protein L31e; Belongs to the ribosomal protein L31e family. | 0.984 |
| eif1a | rpl7ae | Arcpr_0063 | Arcpr_0494 | Translation initiation factor eIF-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | Ribosomal protein L7Ae/L30e/S12e/Gadd45; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.998 |
| eif1a | rps12 | Arcpr_0063 | Arcpr_0982 | Translation initiation factor eIF-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | Ribosomal protein S23 (S12); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family. | 0.999 |
| eif1a | rps3ae | Arcpr_0063 | Arcpr_0797 | Translation initiation factor eIF-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | PFAM: ribosomal protein S3Ae; KEGG: 40S ribosomal protein S3A; K02984 small subunit ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.991 |
| eif1a | rps9 | Arcpr_0063 | Arcpr_0131 | Translation initiation factor eIF-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | PFAM: ribosomal protein S9; KEGG: rps16; 40S ribosomal protein S16; K02960 small subunit ribosomal protein S16e; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
| rpl13 | eif1a | Arcpr_0132 | Arcpr_0063 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Translation initiation factor eIF-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits. | 0.947 |
| rpl13 | rpl15e | Arcpr_0132 | Arcpr_0065 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: Ribosomal protein L15e; KEGG: hypothetical protein; K02877 large subunit ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family. | 0.999 |
| rpl13 | rpl24 | Arcpr_0132 | Arcpr_1350 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein L24; Located at the polypeptide exit tunnel on the outside of the subunit. | 0.999 |
| rpl13 | rpl24e | Arcpr_0132 | Arcpr_0496 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein L24E; Binds to the 23S rRNA. | 0.999 |
| rpl13 | rpl30e | Arcpr_0132 | Arcpr_0980 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: GL20290 gene product from transcript GL20290- RA; Belongs to the eukaryotic ribosomal protein eL30 family. | 0.999 |
| rpl13 | rpl31e | Arcpr_0132 | Arcpr_0236 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: Ribosomal protein L31e; KEGG: rpl31; 60S ribosomal protein L31; K02910 large subunit ribosomal protein L31e; Belongs to the ribosomal protein L31e family. | 0.999 |
| rpl13 | rpl7ae | Arcpr_0132 | Arcpr_0494 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein L7Ae/L30e/S12e/Gadd45; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.998 |
| rpl13 | rps12 | Arcpr_0132 | Arcpr_0982 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ribosomal protein S23 (S12); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family. | 0.998 |
| rpl13 | rps3ae | Arcpr_0132 | Arcpr_0797 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: ribosomal protein S3Ae; KEGG: 40S ribosomal protein S3A; K02984 small subunit ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.997 |
| rpl13 | rps9 | Arcpr_0132 | Arcpr_0131 | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: ribosomal protein S9; KEGG: rps16; 40S ribosomal protein S16; K02960 small subunit ribosomal protein S16e; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
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