STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE56180.1Helicase domain protein; KEGG: ade:Adeh_3405 DEAD/DEAH box helicase-like; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: helicase domain protein; DEAD-like helicase. (527 aa)    
Predicted Functional Partners:
ADE57533.1
PFAM: O-antigen polymerase; KEGG: bph:Bphy_0448 O-antigen polymerase.
  
     0.620
ADE57587.1
PFAM: OstA family protein; KEGG: dat:HRM2_26760 OstA.
  
     0.580
ADE57473.1
PFAM: conserved hypothetical protein; KEGG: maq:Maqu_3008 hypothetical protein.
  
     0.579
ADE56181.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: psp:PSPPH_4862 histidine ABC transporter, permease protein, putative.
       0.547
ADE56182.1
KEGG: swd:Swoo_1847 glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.547
ADE56183.1
PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: dat:HRM2_38080 ProX.
       0.547
ADE57606.1
PFAM: protein of unknown function DUF1022; KEGG: tbd:Tbd_1867 hypothetical protein.
  
     0.519
ADE57895.1
PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: glo:Glov_2412 major facilitator superfamily MFS_1.
  
     0.494
ADE56441.1
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.483
ADE57727.1
PFAM: AMP-dependent synthetase and ligase; KEGG: ppr:PBPRA1287 long-chain-fatty acid-CoAligase.
  
     0.443
Your Current Organism:
Aminobacterium colombiense
NCBI taxonomy Id: 572547
Other names: A. colombiense DSM 12261, Aminobacterium colombiense DSM 12261, Aminobacterium colombiense str. DSM 12261, Aminobacterium colombiense strain DSM 12261
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.