STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE56281.1KEGG: dde:Dde_1255 fumarate hydratase; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region. (296 aa)    
Predicted Functional Partners:
ADE56282.1
TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; KEGG: cco:CCC13826_1007 L(+)-tartrate dehydratase subunit beta; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region.
  
 0.996
fumC
Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 
 0.974
ADE56284.1
KEGG: malic enzyme; K00027 malate dehydrogenase (oxaloacetate-decarboxylating); PFAM: malic protein NAD-binding; malic protein domain protein.
  
 
 0.955
ADE57470.1
PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: malic enzyme.
  
 
 0.919
ADE57903.1
Malate dehydrogenase (oxaloacetate- decarboxylating); KEGG: malic enzyme; PFAM: malic protein NAD-binding; malic protein domain protein.
  
 
 0.919
argH
KEGG: dal:Dalk_0410 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase.
    
 0.814
ADE57672.1
PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; molybdopterin oxidoreductase; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; KEGG: sfu:Sfum_3509 formate dehydrogenase, alpha subunit.
   
 
  0.807
ADE56289.1
PFAM: aminotransferase class I and II; KEGG: mes:Meso_2107 aspartate aminotransferase.
    
  0.801
ADE56511.1
PFAM: aminotransferase class I and II; KEGG: ftm:FTM_0473 aspartate aminotransferase.
    
  0.801
ADE56655.1
PFAM: aminotransferase class I and II; KEGG: gur:Gura_2501 aminotransferase, class I and II.
    
  0.801
Your Current Organism:
Aminobacterium colombiense
NCBI taxonomy Id: 572547
Other names: A. colombiense DSM 12261, Aminobacterium colombiense DSM 12261, Aminobacterium colombiense str. DSM 12261, Aminobacterium colombiense strain DSM 12261
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