STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE56292.1PFAM: protein of unknown function DUF112 transmembrane; KEGG: pmr:PMI2935 hypothetical protein. (503 aa)    
Predicted Functional Partners:
ADE56290.1
PFAM: conserved hypothetical protein; KEGG: bpt:Bpet3357 putative secreted protein.
  
 0.946
ADE57416.1
PFAM: protein of unknown function DUF112 transmembrane; KEGG: efe:EFER_3654 hypothetical protein.
  
  
 
0.909
ADE57418.1
PFAM: conserved hypothetical protein; KEGG: mmw:Mmwyl1_0498 hypothetical protein.
 
  
 0.894
ADE56291.1
KEGG: ebr:ECB_03720 hypothetical protein.
       0.757
ADE56293.1
PFAM: pyruvate carboxyltransferase; KEGG: bps:BPSS1807 4-hydroxy-2-ketovalerate aldolase.
       0.730
Your Current Organism:
Aminobacterium colombiense
NCBI taxonomy Id: 572547
Other names: A. colombiense DSM 12261, Aminobacterium colombiense DSM 12261, Aminobacterium colombiense str. DSM 12261, Aminobacterium colombiense strain DSM 12261
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.