STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgB1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (633 aa)    
Predicted Functional Partners:
glgA
Glycogen/starch synthase, ADP-glucose type; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
 
 0.999
ADE56379.1
TIGRFAM: alpha-glucan phosphorylase; KEGG: pca:Pcar_1731 glucan phosphorylase; PFAM: glycosyl transferase family 35.
 
 0.996
ADE56380.1
TIGRFAM: 4-alpha-glucanotransferase; KEGG: sfu:Sfum_3452 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77.
 
 0.983
ADE56382.1
PFAM: glycoside hydrolase family 57; KEGG: sfu:Sfum_2350 glycoside hydrolase family protein.
     
 0.800
ADE56393.1
PFAM: glycosyl transferase group 1; KEGG: sfu:Sfum_2348 glycosyl transferase, group 1.
  
 0.781
ADE57604.1
PFAM: glycosyl transferase group 1; KEGG: dol:Dole_1437 glycosyl transferase group 1.
  
 0.781
ADE57605.1
PFAM: glycosyl transferase group 1; KEGG: aby:ABAYE3345 putative glycosyltransferase.
  
 0.781
ADE57834.1
PFAM: glycosyl transferase group 1; KEGG: reh:H16_B0025 glycosyl transferase.
  
 0.781
ADE57836.1
PFAM: glycosyl transferase group 1; KEGG: pae:PA3149 glycosyltransferase WbpH.
  
 0.781
ADE57365.1
Beta-phosphoglucomutase family hydrolase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
 
 0.691
Your Current Organism:
Aminobacterium colombiense
NCBI taxonomy Id: 572547
Other names: A. colombiense DSM 12261, Aminobacterium colombiense DSM 12261, Aminobacterium colombiense str. DSM 12261, Aminobacterium colombiense strain DSM 12261
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.