STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE56498.1Transcriptional regulator, CdaR; PFAM: sugar diacid recognition domain protein; KEGG: tau:Tola_2578 transcriptional regulator, CdaR. (400 aa)    
Predicted Functional Partners:
ADE56353.1
Transcriptional regulator, PucR family; PFAM: purine catabolism PurC domain protein; KEGG: ppu:PP_3188 hypothetical protein.
 
     0.594
ADE56499.1
Hypothetical protein.
       0.503
ADE56321.1
KEGG: maq:Maqu_2898 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; extracellular solute-binding protein family 3; SMART: ATP-binding region ATPase domain protein; extracellular solute-binding protein family 3.
  
     0.469
ADE56496.1
PFAM: Lytic transglycosylase catalytic; KEGG: pne:Pnec_0365 lytic transglycosylase catalytic.
  
     0.466
ADE57969.1
Transcriptional regulator, CdaR; PFAM: purine catabolism PurC domain protein; KEGG: dda:Dd703_0778 transcriptional regulator, PucR family.
  
     0.455
ADE57661.1
Transcriptional regulator, CdaR; KEGG: pfs:PFLU2110 hypothetical protein.
  
     0.437
ADE56407.1
TIGRFAM: proton-coupled thiamine transporter YuaJ; PFAM: thiamine transporter YuaJ.
  
     0.427
Your Current Organism:
Aminobacterium colombiense
NCBI taxonomy Id: 572547
Other names: A. colombiense DSM 12261, Aminobacterium colombiense DSM 12261, Aminobacterium colombiense str. DSM 12261, Aminobacterium colombiense strain DSM 12261
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.