STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE56592.1Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification. (1064 aa)    
Predicted Functional Partners:
ADE56590.1
PFAM: N-6 DNA methylase; KEGG: afr:AFE_2793 type I restriction-modification system, M subunit.
 
 0.999
ADE56591.1
PFAM: restriction modification system DNA specificity domain; KEGG: cjj:CJJ81176_1536 hypothetical protein.
 
  
 0.986
ADE56589.1
PFAM: restriction modification system DNA specificity domain; KEGG: bcs:BCAN_B0855 hypothetical protein.
 
  
 0.955
ADE56593.1
PFAM: Uncharacterised conserved protein UCP037246.
       0.631
ADE57454.1
KEGG: sfu:Sfum_0411 helicase domain-containing protein; PFAM: helicase domain protein; type III restriction protein res subunit; SMART: helicase domain protein; DEAD-like helicase.
  
  
 0.508
ADE56594.1
Hypothetical protein.
       0.439
ADE56208.1
PFAM: permease; KEGG: dps:DP0945 hypothetical protein.
  
    0.400
Your Current Organism:
Aminobacterium colombiense
NCBI taxonomy Id: 572547
Other names: A. colombiense DSM 12261, Aminobacterium colombiense DSM 12261, Aminobacterium colombiense str. DSM 12261, Aminobacterium colombiense strain DSM 12261
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.