STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE56852.1PFAM: Na+/solute symporter; KEGG: ppd:Ppro_1337 Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (456 aa)    
Predicted Functional Partners:
ADE57569.1
PFAM: carbon starvation protein CstA; KEGG: scl:sce6207 carbon starvation protein A.
 
    0.769
ADE56422.1
PFAM: sodium:dicarboxylate symporter; KEGG: dat:HRM2_45810 proton/sodium-glutamate symport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
  
 0.585
ADE56321.1
KEGG: maq:Maqu_2898 signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; extracellular solute-binding protein family 3; SMART: ATP-binding region ATPase domain protein; extracellular solute-binding protein family 3.
 
 
 0.552
ADE56375.1
PFAM: Na+/H+ antiporter NhaC-like; KEGG: dde:Dde_0208 hypothetical protein.
 
  
 0.543
ADE56804.1
PFAM: outer membrane chaperone Skp (OmpH); KEGG: msu:MS1923 HlpA protein.
 
     0.505
ADE56195.1
KEGG: sfu:Sfum_3901 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
 0.497
ADE56218.1
KEGG: shl:Shal_3486 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
 0.497
ADE56558.1
KEGG: dvu:DVU0105 glutamine ABC transporter, ATP- binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
 0.497
pxpA
LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
  
    0.487
ADE56206.1
PFAM: phosphoribosyltransferase; KEGG: dps:DP0918 adenine phosphoribosyltransferase.
   
  
 0.481
Your Current Organism:
Aminobacterium colombiense
NCBI taxonomy Id: 572547
Other names: A. colombiense DSM 12261, Aminobacterium colombiense DSM 12261, Aminobacterium colombiense str. DSM 12261, Aminobacterium colombiense strain DSM 12261
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.