STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE56935.1PFAM: V-type ATPase 116 kDa subunit; KEGG: gur:Gura_0418 H(+)-transporting two-sector ATPase. (668 aa)    
Predicted Functional Partners:
ADE56936.1
PFAM: H+transporting two-sector ATPase C subunit; KEGG: dal:Dalk_4310 ATP synthase F0, C subunit.
 
 0.999
ADE56939.1
PFAM: Vacuolar H+transporting two-sector ATPase F subunit.
 
 0.999
atpA
H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
 0.999
atpB
H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
 
 0.999
atpD
V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
ADE56937.1
PFAM: H+transporting two-sector ATPase E subunit.
 
 0.996
ADE56938.1
PFAM: H+transporting two-sector ATPase C (AC39) subunit; KEGG: VAT3; vacuolar proton pump D subunit; K02146 V-type H+-transporting ATPase subunit AC39.
 
 0.996
atpA-2
H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
 
 0.989
atpB-2
H(+)-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.
 
 0.988
ADE57115.1
PFAM: H+transporting two-sector ATPase C subunit; KEGG: gur:Gura_0419 H+-transporting two-sector ATPase, C subunit.
 
 0.984
Your Current Organism:
Aminobacterium colombiense
NCBI taxonomy Id: 572547
Other names: A. colombiense DSM 12261, Aminobacterium colombiense DSM 12261, Aminobacterium colombiense str. DSM 12261, Aminobacterium colombiense strain DSM 12261
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.