Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADE56540.1 | ADE57181.1 | Amico_0397 | Amico_1057 | KEGG: dde:Dde_0671 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | PFAM: major facilitator superfamily MFS_1; KEGG: dal:Dalk_0091 major facilitator superfamily MFS_1. | 0.524 |
ADE57180.1 | ADE57181.1 | Amico_1056 | Amico_1057 | KEGG: sfu:Sfum_3401 selenide, water dikinase; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein. | PFAM: major facilitator superfamily MFS_1; KEGG: dal:Dalk_0091 major facilitator superfamily MFS_1. | 0.566 |
ADE57181.1 | ADE56540.1 | Amico_1057 | Amico_0397 | PFAM: major facilitator superfamily MFS_1; KEGG: dal:Dalk_0091 major facilitator superfamily MFS_1. | KEGG: dde:Dde_0671 secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.524 |
ADE57181.1 | ADE57180.1 | Amico_1057 | Amico_1056 | PFAM: major facilitator superfamily MFS_1; KEGG: dal:Dalk_0091 major facilitator superfamily MFS_1. | KEGG: sfu:Sfum_3401 selenide, water dikinase; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein. | 0.566 |