STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE57224.1PFAM: Peptidase M15A; protein of unknown function DUF882; KEGG: dde:Dde_1882 hypothetical protein. (125 aa)    
Predicted Functional Partners:
ADE57221.1
Hypothetical protein.
       0.773
ADE57222.1
Hypothetical protein.
       0.773
ADE57223.1
KEGG: dvm:DvMF_1661 hypothetical protein.
       0.773
ADE57220.1
Hypothetical protein.
       0.757
ADE57219.1
Hypothetical protein.
       0.736
ADE57225.1
Hypothetical protein; KEGG: sat:SYN_02282 putative cytoplasmic protein.
       0.566
ADE57235.1
KEGG: pmr:PMI1973 phage tail fiber protein (tape measure protein); TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region.
 
     0.527
ADE57232.1
KEGG: pct:PC1_1573 phage baseplate assembly protein V; TIGRFAM: phage baseplate assembly protein V; PFAM: baseplate assembly protein V.
 
     0.508
ADE57228.1
PFAM: Baseplate J family protein; KEGG: spe:Spro_4957 baseplate J family protein.
 
     0.506
ADE57231.1
Contains selenocysteine; PFAM: PAAR repeat-containing protein; KEGG: avi:Avi_3257 phospholipase.
 
     0.500
Your Current Organism:
Aminobacterium colombiense
NCBI taxonomy Id: 572547
Other names: A. colombiense DSM 12261, Aminobacterium colombiense DSM 12261, Aminobacterium colombiense str. DSM 12261, Aminobacterium colombiense strain DSM 12261
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.