STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE57334.1TIGRFAM: 3-oxoacid CoA-transferase, A subunit; KEGG: ecx:EcHS_A2362 acetyl-CoA:acetoacetyl-CoA transferase subunit alpha; PFAM: coenzyme A transferase. (235 aa)    
Predicted Functional Partners:
ADE57333.1
TIGRFAM: 3-oxoacid CoA-transferase, B subunit; KEGG: cko:CKO_00547 hypothetical protein; PFAM: coenzyme A transferase.
 0.999
ADE57332.1
TIGRFAM: acetyl-CoA acetyltransferase; KEGG: sfu:Sfum_3582 acetyl-CoA acetyltransferases; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.990
ADE57953.1
KEGG: tau:Tola_2471 phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase.
  
 
 0.914
ADE57954.1
Phosphate butyryltransferase; KEGG: bxe:Bxe_C0052 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase.
  
 
 0.914
buk
KEGG: geo:Geob_0116 butyrate kinase; TIGRFAM: butyrate kinase; PFAM: acetate and butyrate kinase; Belongs to the acetokinase family.
    
 0.911
buk-2
KEGG: pca:Pcar_2852 butyrate kinase; TIGRFAM: butyrate kinase; PFAM: acetate and butyrate kinase; Belongs to the acetokinase family.
    
 0.911
ADE57335.1
KEGG: sfu:Sfum_3721 TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
       0.761
ADE57015.1
KEGG: hypothetical protein.
  
  
 0.539
ADE57330.1
KEGG: ank:AnaeK_1881 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR.
       0.417
ADE57331.1
Histidine kinase; KEGG: gsu:GSU1292 sensory box histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
       0.417
Your Current Organism:
Aminobacterium colombiense
NCBI taxonomy Id: 572547
Other names: A. colombiense DSM 12261, Aminobacterium colombiense DSM 12261, Aminobacterium colombiense str. DSM 12261, Aminobacterium colombiense strain DSM 12261
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