STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE57458.1PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: dde:Dde_1549 TRAP-type C4-dicarboxylate transport system small permease component-like. (174 aa)    
Predicted Functional Partners:
ADE57459.1
PFAM: Extracellular solute-binding protein, family 7, bacteria; KEGG: csa:Csal_0660 TRAP dicarboxylate transporter, DctP subunit.
 
  
 0.957
ADE57457.1
KEGG: dde:Dde_1550 TRAP dicarboxylate transporter- DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
  
 
 0.868
ADE57456.1
Peptidase M15D vanX D-ala-D-ala dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
 
     0.814
ADE56236.1
KEGG: pol:Bpro_0088 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria.
 
  
 0.763
ADE57791.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pol:Bpro_5096 tripartite ATP-independent periplasmic transporter DctQ.
  
     0.759
ADE57991.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: mes:Meso_2517 tripartite ATP-independent periplasmic transporter DctQ.
  
     0.748
ADE56279.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: bbr:BB3422 putative inner membrane transport protein.
  
     0.746
ADE57704.1
KEGG: dat:HRM2_45600 DctP10; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria.
 
  
 0.740
ADE56237.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: dal:Dalk_0472 tripartite ATP-independent periplasmic transporter DctQ component.
  
     0.733
ADE57944.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: vfm:VFMJ11_A0038 trap-type C4-dicarboxylate transport system, small permease component.
  
     0.728
Your Current Organism:
Aminobacterium colombiense
NCBI taxonomy Id: 572547
Other names: A. colombiense DSM 12261, Aminobacterium colombiense DSM 12261, Aminobacterium colombiense str. DSM 12261, Aminobacterium colombiense strain DSM 12261
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.