STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE57473.1PFAM: conserved hypothetical protein; KEGG: maq:Maqu_3008 hypothetical protein. (356 aa)    
Predicted Functional Partners:
ADE57472.1
Putative protein-S-isoprenylcysteine methyltransferase-like protein; KEGG: sfu:Sfum_3255 isoprenylcysteine carboxyl methyltransferase.
 
    0.857
ADE57476.1
PFAM: NAD-dependent epimerase/dehydratase; polysaccharide biosynthesis protein CapD; KEGG: reu:Reut_A0719 NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase:dTDP-4-dehydrorhamnose reductase.
     
 0.787
ADE57474.1
TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: gme:Gmet_0923 D-alpha,beta-D-heptose 1,7- bisphosphate phosphatase.
       0.786
ADE57475.1
KEGG: hypothetical protein.
       0.786
ADE57477.1
PFAM: Nucleotidyl transferase; KEGG: pen:PSEEN2466 phospho-sugar nucleotidyltransferase.
     
 0.774
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily.
       0.751
ADE57590.1
Hypothetical protein.
  
     0.742
ADE56441.1
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
 
     0.713
ADE57580.1
Hypothetical protein.
  
   
 0.712
ADE56804.1
PFAM: outer membrane chaperone Skp (OmpH); KEGG: msu:MS1923 HlpA protein.
  
     0.711
Your Current Organism:
Aminobacterium colombiense
NCBI taxonomy Id: 572547
Other names: A. colombiense DSM 12261, Aminobacterium colombiense DSM 12261, Aminobacterium colombiense str. DSM 12261, Aminobacterium colombiense strain DSM 12261
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