STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE57659.1PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pin:Ping_2034 tripartite ATP-independent periplasmic transporter DctQ. (180 aa)    
Predicted Functional Partners:
ADE57658.1
KEGG: maq:Maqu_0352 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit.
 
 
 0.960
ADE57048.1
Hypothetical protein; KEGG: dps:DP0488 DctQ (C4-dicarboxylate permease, small subunit).
  
  
  0.932
ADE57703.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: dat:HRM2_45590 DctQ10.
  
  
 
0.921
ADE57438.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: mmw:Mmwyl1_1470 tripartite ATP-independent periplasmic transporter DctQ.
  
  
 
0.920
ADE56279.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: bbr:BB3422 putative inner membrane transport protein.
  
  
 
0.914
ADE57657.1
TRAP dicarboxylate transporter, DctP subunit; KEGG: vsp:VS_II0052 putative C4-dicarboxylate- binding periplasmic protein DctP; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria.
 
  
 0.908
ADE56347.1
Hypothetical protein; KEGG: dps:DP1511 DctQ (C4-dicarboxylate permease, small subunit).
     
  0.900
ADE57944.1
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: vfm:VFMJ11_A0038 trap-type C4-dicarboxylate transport system, small permease component.
  
     0.730
ADE57660.1
PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: kpe:KPK_2645 peptidase, ArgE/DapE family.
       0.727
ADE57459.1
PFAM: Extracellular solute-binding protein, family 7, bacteria; KEGG: csa:Csal_0660 TRAP dicarboxylate transporter, DctP subunit.
 
  
 0.699
Your Current Organism:
Aminobacterium colombiense
NCBI taxonomy Id: 572547
Other names: A. colombiense DSM 12261, Aminobacterium colombiense DSM 12261, Aminobacterium colombiense str. DSM 12261, Aminobacterium colombiense strain DSM 12261
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