STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE57686.1PFAM: basic membrane lipoprotein; KEGG: smd:Smed_3654 basic membrane lipoprotein. (334 aa)    
Predicted Functional Partners:
ADE57683.1
KEGG: rlt:Rleg2_6253 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.992
ADE57684.1
PFAM: inner-membrane translocator; KEGG: smd:Smed_3656 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.989
ADE57685.1
PFAM: inner-membrane translocator; KEGG: smd:Smed_3657 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.989
ADE56388.1
KEGG: dat:HRM2_06320 RbsA1; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.978
ADE56386.1
PFAM: inner-membrane translocator; KEGG: dvl:Dvul_1925 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.968
ADE56387.1
PFAM: inner-membrane translocator; KEGG: dde:Dde_0138 branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.968
ADE56389.1
PFAM: basic membrane lipoprotein; KEGG: dps:DP0677 hypothetical protein.
 
  
 
0.925
ADE57687.1
PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; KEGG: sun:SUN_0890 5'-nucleotidase; Belongs to the 5'-nucleotidase family.
 
  
 0.856
ADE56501.1
ABC transporter related protein; KEGG: pay:PAU_00052 ribose transport atp-binding protein RbsA; PFAM: ABC transporter related; SMART: AAA ATPase.
     0.494
Your Current Organism:
Aminobacterium colombiense
NCBI taxonomy Id: 572547
Other names: A. colombiense DSM 12261, Aminobacterium colombiense DSM 12261, Aminobacterium colombiense str. DSM 12261, Aminobacterium colombiense strain DSM 12261
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